Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   PF977_RS11615 Genome accession   NZ_CP116012
Coordinates   2211552..2212169 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM124333     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2206552..2217169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS11580 (PF977_11580) ynzD 2206794..2206967 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  PF977_RS11585 (PF977_11585) yneF 2207041..2207259 (-) 219 WP_003221221.1 YneF family protein -
  PF977_RS11590 (PF977_11590) sirA 2207345..2207791 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  PF977_RS11595 (PF977_11595) recP/tkt 2207944..2209947 (-) 2004 WP_015714012.1 transketolase Machinery gene
  PF977_RS11600 (PF977_11600) ynzC 2210116..2210349 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  PF977_RS11605 (PF977_11605) dinL 2210413..2211066 (-) 654 WP_015714011.1 YneB family resolvase-like protein -
  PF977_RS11610 (PF977_11610) yneA 2211085..2211402 (-) 318 WP_015252003.1 cell division suppressor protein YneA -
  PF977_RS11615 (PF977_11615) dinR/lexA 2211552..2212169 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  PF977_RS11620 (PF977_11620) - 2212456..2212795 (-) 340 Protein_2290 hypothetical protein -
  PF977_RS11625 (PF977_11625) fosB 2212719..2213137 (-) 419 Protein_2291 metallothiol transferase FosB -
  PF977_RS11630 (PF977_11630) - 2213346..2213795 (+) 450 WP_015714007.1 YndM family protein -
  PF977_RS11635 (PF977_11635) pghL 2213822..2214580 (-) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  PF977_RS11640 (PF977_11640) - 2214806..2215120 (-) 315 WP_029726671.1 hypothetical protein -
  PF977_RS11645 (PF977_11645) yndJ 2215198..2216838 (-) 1641 WP_015714004.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=706902 PF977_RS11615 WP_003238209.1 2211552..2212169(+) (dinR/lexA) [Bacillus subtilis strain SRCM124333]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=706902 PF977_RS11615 WP_003238209.1 2211552..2212169(+) (dinR/lexA) [Bacillus subtilis strain SRCM124333]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1