Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   PF977_RS04830 Genome accession   NZ_CP116012
Coordinates   952951..953820 (+) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain SRCM124333     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 947951..958820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS04800 (PF977_04800) pncA 948416..948967 (+) 552 WP_015714627.1 cysteine hydrolase family protein -
  PF977_RS04805 (PF977_04805) pncB 948983..950455 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  PF977_RS04810 (PF977_04810) pdeH 950592..951821 (+) 1230 WP_003228790.1 cyclic di-GMP phosphodiesterase -
  PF977_RS04815 (PF977_04815) - 951797..952165 (-) 369 WP_014477834.1 hypothetical protein -
  PF977_RS04820 (PF977_04820) - 952279..952404 (-) 126 WP_003228793.1 hypothetical protein -
  PF977_RS04825 (PF977_04825) degQ 952626..952766 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  PF977_RS04830 (PF977_04830) comQ 952951..953820 (+) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  PF977_RS04835 (PF977_04835) comX 953817..954038 (+) 222 WP_014114983.1 competence pheromone ComX -
  PF977_RS04840 (PF977_04840) comP 954054..956366 (+) 2313 WP_144460405.1 histidine kinase Regulator
  PF977_RS04845 (PF977_04845) comA 956447..957091 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  PF977_RS04850 (PF977_04850) yuxO 957110..957490 (+) 381 WP_015714624.1 hotdog fold thioesterase -
  PF977_RS04855 (PF977_04855) mnhG 957529..957903 (-) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  PF977_RS04860 (PF977_04860) mrpF 957887..958171 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  PF977_RS04865 (PF977_04865) mrpE 958171..958647 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=706857 PF977_RS04830 WP_015714626.1 952951..953820(+) (comQ) [Bacillus subtilis strain SRCM124333]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=706857 PF977_RS04830 WP_015714626.1 952951..953820(+) (comQ) [Bacillus subtilis strain SRCM124333]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTGATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429