Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | PF976_RS20140 | Genome accession | NZ_CP116011 |
| Coordinates | 3892809..3893405 (+) | Length | 198 a.a. |
| NCBI ID | WP_003150697.1 | Uniprot ID | A7Z0E4 |
| Organism | Bacillus amyloliquefaciens strain SRCM124317 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3887809..3898405
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PF976_RS20115 (PF976_20115) | - | 3889156..3889668 (-) | 513 | WP_271229926.1 | isochorismatase family cysteine hydrolase | - |
| PF976_RS20120 (PF976_20120) | tadA | 3889790..3890272 (+) | 483 | WP_013350737.1 | tRNA adenosine(34) deaminase TadA | - |
| PF976_RS20130 (PF976_20130) | dnaX | 3890755..3892446 (+) | 1692 | WP_013350738.1 | DNA polymerase III subunit gamma/tau | - |
| PF976_RS20135 (PF976_20135) | - | 3892471..3892794 (+) | 324 | WP_003150700.1 | YbaB/EbfC family nucleoid-associated protein | - |
| PF976_RS20140 (PF976_20140) | recR | 3892809..3893405 (+) | 597 | WP_003150697.1 | recombination protein RecR | Machinery gene |
| PF976_RS20145 (PF976_20145) | - | 3893424..3893648 (+) | 225 | WP_013350739.1 | YaaL family protein | - |
| PF976_RS20150 (PF976_20150) | - | 3893709..3893972 (+) | 264 | WP_013350740.1 | pro-sigmaK processing inhibitor BofA family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21990.53 Da Isoelectric Point: 5.3504
>NTDB_id=706828 PF976_RS20140 WP_003150697.1 3892809..3893405(+) (recR) [Bacillus amyloliquefaciens strain SRCM124317]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=706828 PF976_RS20140 WP_003150697.1 3892809..3893405(+) (recR) [Bacillus amyloliquefaciens strain SRCM124317]
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATTACAGATCAGGACCCTTGTTATATATGCGAGGATACAAGAAGAGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAAGATGTTATTGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTGCT
TCACGGCGCGATTTCTCCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAACTGCTGAAGCGCCTTCAGGATG
ACCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCGAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGCCTGCCCGTCGGCGGCGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCGCTTGAAGGAAGACGTGAATTGTAA
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATTACAGATCAGGACCCTTGTTATATATGCGAGGATACAAGAAGAGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAAGATGTTATTGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTGCT
TCACGGCGCGATTTCTCCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAACTGCTGAAGCGCCTTCAGGATG
ACCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCGAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGCCTGCCCGTCGGCGGCGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCGCTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
98.99 |
100 |
0.99 |
| recR | Streptococcus pneumoniae R6 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.551 |
98.99 |
0.52 |