Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   PF976_RS00395 Genome accession   NZ_CP116011
Coordinates   68554..69636 (+) Length   360 a.a.
NCBI ID   WP_014469611.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain SRCM124317     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 63554..74636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF976_RS00380 (PF976_00380) - 63554..64645 (+) 1092 WP_013350790.1 protein arginine kinase -
  PF976_RS00385 (PF976_00385) clpC 64642..67077 (+) 2436 WP_013350791.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  PF976_RS00390 (PF976_00390) radA/sms 67171..68550 (+) 1380 WP_013350792.1 DNA repair protein RadA Machinery gene
  PF976_RS00395 (PF976_00395) disA 68554..69636 (+) 1083 WP_014469611.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  PF976_RS00400 (PF976_00400) - 69750..70850 (+) 1101 WP_013350794.1 PIN/TRAM domain-containing protein -
  PF976_RS00405 (PF976_00405) ispD 70864..71562 (+) 699 WP_038463178.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  PF976_RS00410 (PF976_00410) ispF 71555..72031 (+) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  PF976_RS00415 (PF976_00415) gltX 72123..73574 (+) 1452 WP_014469613.1 glutamate--tRNA ligase -
  PF976_RS00420 (PF976_00420) cysE 73885..74538 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40643.16 Da        Isoelectric Point: 5.5321

>NTDB_id=706687 PF976_RS00395 WP_014469611.1 68554..69636(+) (disA) [Bacillus amyloliquefaciens strain SRCM124317]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=706687 PF976_RS00395 WP_014469611.1 68554..69636(+) (disA) [Bacillus amyloliquefaciens strain SRCM124317]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACCCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAACGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGAGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACAGCGGAACGGGTGGCAAAGCAGACCGGCTGTCTCGTCATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTCTAGACAAAACGATTACAGCTTTAAACGCCTTAGAATTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGGTATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTTTGTTTAAGCTGCTTGGATATCCCGCTTCTACCAATCTCGATGATTATGTTCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACGGAAGCGACAGCCGAAGAACTGGATGATGTTGAAGGTATCGGCGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947