Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NLV76_RS02240 Genome accession   NZ_CP100752
Coordinates   435519..436469 (+) Length   316 a.a.
NCBI ID   WP_254502439.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 430519..441469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS02215 (NLV76_02215) rapC 431908..433056 (+) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator
  NLV76_RS02220 (NLV76_02220) phrC 433040..433162 (+) 123 WP_010333023.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NLV76_RS02225 (NLV76_02225) - 433267..433359 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  NLV76_RS02230 (NLV76_02230) - 433506..433616 (-) 111 WP_024120215.1 YjcZ family sporulation protein -
  NLV76_RS02235 (NLV76_02235) - 433769..435133 (-) 1365 WP_254502437.1 aspartate kinase -
  NLV76_RS02240 (NLV76_02240) ceuB 435519..436469 (+) 951 WP_254502439.1 petrobactin ABC transporter permease YclN Machinery gene
  NLV76_RS02245 (NLV76_02245) yclO 436462..437409 (+) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -
  NLV76_RS02250 (NLV76_02250) yclP 437403..438161 (+) 759 WP_254502441.1 petrobactin ABC transporter ATP-binding protein YclP -
  NLV76_RS02255 (NLV76_02255) - 438183..439136 (+) 954 WP_254502443.1 siderophore ABC transporter substrate-binding protein -
  NLV76_RS02260 (NLV76_02260) - 439185..440603 (-) 1419 WP_044161878.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34983.43 Da        Isoelectric Point: 9.8154

>NTDB_id=706655 NLV76_RS02240 WP_254502439.1 435519..436469(+) (ceuB) [Bacillus halotolerans strain MEC_B301]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILEKIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLILVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=706655 NLV76_RS02240 WP_254502439.1 435519..436469(+) (ceuB) [Bacillus halotolerans strain MEC_B301]
ATGAAGCTACGTTACTTATTTTTTCTGCTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATTTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCGACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTGA
TCGCGGGCATGAGCATGAGCATCTGCGGCCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAAAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTCTCGTATCTCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATTTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538