Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PG908_RS03455 Genome accession   NZ_CP115957
Coordinates   715493..715960 (+) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain PSS4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 710493..720960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PG908_RS03430 - 710628..711467 (-) 840 WP_011000620.1 TPM domain-containing protein -
  PG908_RS03435 - 711480..712106 (-) 627 WP_016723449.1 LemA family protein -
  PG908_RS03440 dapA 712490..713404 (+) 915 WP_011000622.1 4-hydroxy-tetrahydrodipicolinate synthase -
  PG908_RS03445 hemL 713507..714808 (-) 1302 WP_011000623.1 glutamate-1-semialdehyde 2,1-aminomutase -
  PG908_RS03450 - 715020..715202 (+) 183 WP_003261842.1 rubredoxin -
  PG908_RS03455 pilG 715493..715960 (+) 468 WP_016723446.1 response regulator Regulator
  PG908_RS03460 pilH 715992..716360 (+) 369 WP_003269243.1 response regulator Machinery gene
  PG908_RS03465 - 716419..716964 (+) 546 WP_011000625.1 chemotaxis protein CheW -
  PG908_RS03470 - 717210..719441 (+) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=706397 PG908_RS03455 WP_016723446.1 715493..715960(+) (pilG) [Ralstonia pseudosolanacearum strain PSS4]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=706397 PG908_RS03455 WP_016723446.1 715493..715960(+) (pilG) [Ralstonia pseudosolanacearum strain PSS4]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419