Detailed information NTG0070604

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: FGCSD_RS09755
• Genome accession: NZ_AP018726
• Coordinates: 1969008..1970060 (-)
• Length: 350 a.a.
• NCBI ID: WP_129556269.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain Kdys0611
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1964008..1975060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGCSD_RS09730 (FGCSD_1895)	rimI	1964577..1965002 (-)	426	WP_115245668.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGCSD_RS09735 (FGCSD_1896)	tsaB	1965004..1965702 (-)	699	WP_129556267.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGCSD_RS09740 (FGCSD_1897)	-	1965988..1966218 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FGCSD_RS09745 (FGCSD_1898)	rnjA	1966220..1967902 (+)	1683	WP_003056700.1	ribonuclease J1	-
FGCSD_RS09750 (FGCSD_1899)	amiF	1968083..1969015 (-)	933	WP_129556268.1	ATP-binding cassette domain-containing protein	Regulator
FGCSD_RS09755 (FGCSD_1900)	oppD	1969008..1970060 (-)	1053	WP_129556269.1	ABC transporter ATP-binding protein	Regulator
FGCSD_RS09760 (FGCSD_1901)	-	1970072..1971103 (-)	1032	WP_129556270.1	ABC transporter permease	-
FGCSD_RS09765 (FGCSD_1902)	-	1971113..1972027 (-)	915	WP_003052794.1	ABC transporter permease	-
FGCSD_RS09770 (FGCSD_1903)	-	1972295..1973950 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38667.36 Da
• Isoelectric Point: 5.8490

>NTDB_id=70604 FGCSD_RS09755 WP_129556269.1 1969008..1970060(-) (oppD) [Streptococcus dysgalactiae strain Kdys0611]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFDLKKGETLAIVGESGSGKSVTTRTLMGLNAKNANLSGEIDFKGKKLNAL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENISKQEALSRALELMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILKLMKEIQQQTESSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTASGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHVKAPPMFKVSDTHYAATWLL
DERAPKVTPPVQIQKRWAKWQKREGGKLNE

Nucleotide

• Length: 1053 bp

>NTDB_id=70604 FGCSD_RS09755 WP_129556269.1 1969008..1970060(-) (oppD) [Streptococcus dysgalactiae strain Kdys0611]
ATGACAAACGAAACCATTTTAAGTGTTAAAAACCTCCACGTTGATTTCAAAACCTATGCAGGGGATGTGAAAGCTATTCG
AGATATTAGTTTTGACCTCAAAAAAGGAGAAACGCTTGCGATTGTTGGGGAATCTGGATCAGGAAAATCAGTGACCACTA
GGACCTTGATGGGCTTAAATGCTAAAAATGCTAACCTTTCTGGGGAGATTGATTTTAAAGGAAAAAAACTCAATGCCCTT
AAGGAAGAAGAATGGGTTAAGGTGCGTGGTAAAGAAATTGCCATGATTTTCCAAGATCCAATGACCAGTCTCGATCCAAC
GATGAAAATCGGAATGCAAATTGCTGAAGCTATTTTGATTCATGAGAATATTAGTAAGCAAGAAGCCTTGAGTCGCGCCC
TTGAATTGATGCATCAAGTAGGTATTCCAAATGCTGAAGAGCATATTAATGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAGCGTGCTGTGATTGCTATCGCTCTTGCAGCTAATCCAGAAATCCTGATTGCTGATGAACCGACCACAGCGCTTGA
TGTTACCATTCAGGCACAAATCTTGAAATTAATGAAAGAAATCCAACAACAGACGGAATCGTCTATTATTTTCATTACCC
ATGACCTTGGCGTTGTGGCTGGTATGGCTGACCGTGTCGCGGTAATGTATGCTGGAAAAATTGTTGAGTATGGAACGGTG
GATGAAGTCTTTTATAACCCACAACACCCTTATACATGGGGCTTGCTTAATTCTATGCCGACCACAGATACCGCCTCAGG
GAGTTTAGAATCTATTCCAGGAACGCCGCCTGACTTGCTTAATCCTCCTAAGGGAGATGCTTTTGCAGCCCGCAATGAAT
TTGCTTTGGATATTGATCATGTGAAGGCTCCGCCGATGTTTAAGGTCAGCGACACCCATTATGCGGCAACTTGGTTATTA
GATGAGCGAGCGCCCAAAGTCACTCCGCCAGTTCAAATTCAAAAACGATGGGCAAAATGGCAAAAACGAGAAGGAGGCAA
GCTAAATGAATGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.429	100	0.794
amiE	Streptococcus salivarius strain HSISS4	55.394	98	0.543
amiE	Streptococcus thermophilus LMG 18311	56.325	94.857	0.534
amiE	Streptococcus thermophilus LMD-9	56.325	94.857	0.534