Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | H7677_RS00360 | Genome accession | NZ_AP023391 |
| Coordinates | 63339..63929 (+) | Length | 196 a.a. |
| NCBI ID | WP_184493695.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain DAT299 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 58339..68929
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7677_RS00350 (DAT299_00500) | - | 59722..61245 (+) | 1524 | WP_105159094.1 | quinol oxidase | - |
| H7677_RS00355 (DAT299_00510) | hexB | 61363..63300 (+) | 1938 | WP_105159093.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| H7677_RS00360 (DAT299_00520) | ruvA | 63339..63929 (+) | 591 | WP_184493695.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| H7677_RS00365 (DAT299_00530) | - | 64559..65119 (+) | 561 | WP_023369037.1 | DNA-3-methyladenine glycosylase I | - |
| H7677_RS00370 (DAT299_00540) | - | 65193..65603 (+) | 411 | WP_172055386.1 | helix-turn-helix transcriptional regulator | - |
| H7677_RS00375 (DAT299_00550) | - | 65576..66241 (+) | 666 | WP_024381977.1 | CPBP family intramembrane glutamic endopeptidase | - |
| H7677_RS00380 (DAT299_00560) | cinA | 66384..67565 (+) | 1182 | WP_184493697.1 | competence/damage-inducible protein A | Machinery gene |
| H7677_RS00385 (DAT299_00570) | recA | 67617..68768 (+) | 1152 | WP_184493699.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21745.11 Da Isoelectric Point: 5.3356
>NTDB_id=70604 H7677_RS00360 WP_184493695.1 63339..63929(+) (ruvA) [Streptococcus suis strain DAT299]
MYDYIKGILTKITAKYIVVETHGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQPVAPSSENIALEEAMEAME
ALGYRPAELKRIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETHGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQPVAPSSENIALEEAMEAME
ALGYRPAELKRIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=70604 H7677_RS00360 WP_184493695.1 63339..63929(+) (ruvA) [Streptococcus suis strain DAT299]
ATGTACGACTATATTAAAGGAATTTTAACGAAAATAACTGCAAAATATATTGTGGTAGAAACGCATGGAGTAGGCTATAT
CTTGCAGGTTGCTAACCCCTACGCTTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGAG
AAGATGCCCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACGGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAAAACATTAC
CTACCTGACCAAGTTTCCAAAGATTGGCAAGAAAACAGCTCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACCAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCTATGGAAGCCATGGAA
GCTCTTGGCTACCGACCAGCCGAACTCAAGAGAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATTTTAACGAAAATAACTGCAAAATATATTGTGGTAGAAACGCATGGAGTAGGCTATAT
CTTGCAGGTTGCTAACCCCTACGCTTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGAG
AAGATGCCCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACGGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAAAACATTAC
CTACCTGACCAAGTTTCCAAAGATTGGCAAGAAAACAGCTCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACCAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCTATGGAAGCCATGGAA
GCTCTTGGCTACCGACCAGCCGAACTCAAGAGAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
75.635 |
100 |
0.76 |
| ruvA | Streptococcus pneumoniae D39 |
75.635 |
100 |
0.76 |
| ruvA | Streptococcus pneumoniae TIGR4 |
75.635 |
100 |
0.76 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
38.916 |
100 |
0.403 |