Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   OSK17_RS20190 Genome accession   NZ_CP115738
Coordinates   3848400..3848774 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain W7     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3843400..3853774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSK17_RS20165 (OSK17_20165) - 3843564..3843725 (-) 162 WP_003227632.1 hypothetical protein -
  OSK17_RS20170 (OSK17_20170) glpX 3843940..3844905 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  OSK17_RS20175 (OSK17_20175) murAB 3844936..3846225 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  OSK17_RS20180 (OSK17_20180) fsa 3846604..3847242 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  OSK17_RS20185 (OSK17_20185) fbaA 3847362..3848219 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  OSK17_RS20190 (OSK17_20190) letA 3848400..3848774 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  OSK17_RS20195 (OSK17_20195) ywjG 3848940..3849461 (+) 522 WP_041850423.1 DUF2529 domain-containing protein -
  OSK17_RS20200 (OSK17_20200) pyrG 3849543..3851150 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  OSK17_RS20205 (OSK17_20205) rpoE 3851392..3851913 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  OSK17_RS20210 (OSK17_20210) acdA 3852096..3853235 (-) 1140 WP_108029079.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=705991 OSK17_RS20190 WP_003227621.1 3848400..3848774(-) (letA) [Bacillus subtilis strain W7]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=705991 OSK17_RS20190 WP_003227621.1 3848400..3848774(-) (letA) [Bacillus subtilis strain W7]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCAAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363