Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FGCSD_RS00360 Genome accession   NZ_AP018726
Coordinates   72603..73376 (+) Length   257 a.a.
NCBI ID   WP_129555131.1    Uniprot ID   A0A9X7S978
Organism   Streptococcus dysgalactiae strain Kdys0611     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 67603..78376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGCSD_RS00340 (FGCSD_0067) - 69220..70242 (+) 1023 WP_172595963.1 IS30 family transposase -
  FGCSD_RS00350 (FGCSD_0068) rlmH 70578..71057 (-) 480 WP_129555129.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGCSD_RS00355 (FGCSD_0069) htrA 71267..72487 (+) 1221 WP_129555130.1 trypsin-like peptidase domain-containing protein Regulator
  FGCSD_RS00360 (FGCSD_0070) spo0J 72603..73376 (+) 774 WP_129555131.1 ParB/RepB/Spo0J family partition protein Regulator
  FGCSD_RS00365 (FGCSD_0071) dnaA 73610..74965 (+) 1356 WP_129555132.1 chromosomal replication initiator protein DnaA -
  FGCSD_RS00370 (FGCSD_0073) dnaN 75119..76255 (+) 1137 WP_111714625.1 DNA polymerase III subunit beta -
  FGCSD_RS00375 (FGCSD_0074) - 76329..76526 (+) 198 WP_129555133.1 DUF951 family protein -
  FGCSD_RS00380 (FGCSD_0075) - 76651..77025 (+) 375 WP_129555134.1 helix-turn-helix transcriptional regulator -
  FGCSD_RS00385 (FGCSD_0076) ychF 77149..78264 (+) 1116 WP_115246999.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28913.57 Da        Isoelectric Point: 9.7853

>NTDB_id=70555 FGCSD_RS00360 WP_129555131.1 72603..73376(+) (spo0J) [Streptococcus dysgalactiae strain Kdys0611]
MSELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEVAKYMGKSRPYISNTLRLLQLPQTISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=70555 FGCSD_RS00360 WP_129555131.1 72603..73376(+) (spo0J) [Streptococcus dysgalactiae strain Kdys0611]
ATGAGTGAACTATTGAAATCTATTCCAATTGAAGATATTGTAGCCAATCCCTATCAACCAAGGCTGCAGTTTAATCAAAA
GGAACTAGAAGATTTGGCTAATTCAATCAAGGCAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAGGTACCTGCTATTGTCAAA
AACATGTCCTCTTTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTACAACGGGCTGATTTAAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACGCATGAAGAGGTTGCCAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTATTGCAACTTCCGCAAACAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACAGACGAAAAGGAACAGTTAGTTTATGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCAGAAAAATAAAAATATTTTTATCACTT
CTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTGCTG
TTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.422

99.611

0.572

Multiple sequence alignment