Detailed information NTG0705465

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NLK52_RS18735
• Genome accession: NZ_CP100436
• Coordinates: 3654084..3655229 (+)
• Length: 381 a.a.
• NCBI ID: WP_015384935.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MEC_B298
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3649084..3660229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLK52_RS18715 (NLK52_18715)	albF	3649102..3650382 (+)	1281	WP_015483836.1	pitrilysin family protein	-
NLK52_RS18720 (NLK52_18720)	albG	3650379..3651080 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NLK52_RS18725 (NLK52_18725)	ywhL	3651086..3652459 (-)	1374	WP_015483837.1	YncE family protein	-
NLK52_RS18730 (NLK52_18730)	ywhK	3652499..3653854 (-)	1356	WP_015384933.1	YncE family protein	-
NLK52_RS20715	-	3653851..3654081 (-)	231	WP_015483838.1	hypothetical protein	-
NLK52_RS18735 (NLK52_18735)	rapF	3654084..3655229 (+)	1146	WP_015384935.1	response regulator aspartate phosphatase RapF	Regulator
NLK52_RS18740 (NLK52_18740)	phrF	3655213..3655332 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NLK52_RS18745 (NLK52_18745)	-	3655560..3656036 (+)	477	WP_015384936.1	hypothetical protein	-
NLK52_RS18750 (NLK52_18750)	-	3656296..3656982 (+)	687	WP_236822444.1	hypothetical protein	-
NLK52_RS18755 (NLK52_18755)	-	3658458..3659105 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
NLK52_RS18760 (NLK52_18760)	-	3659098..3659661 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.08 Da
• Isoelectric Point: 5.1503

>NTDB_id=705465 NLK52_RS18735 WP_015384935.1 3654084..3655229(+) (rapF) [Bacillus subtilis strain MEC_B298]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=705465 NLK52_RS18735 WP_015384935.1 3654084..3655229(+) (rapF) [Bacillus subtilis strain MEC_B298]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575