Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NLK52_RS12175 | Genome accession | NZ_CP100436 |
| Coordinates | 2378689..2379726 (-) | Length | 345 a.a. |
| NCBI ID | WP_015483430.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MEC_B298 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2373689..2384726
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLK52_RS12125 (NLK52_12125) | tasA | 2373788..2374573 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| NLK52_RS12130 (NLK52_12130) | sipW | 2374637..2375209 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| NLK52_RS12135 (NLK52_12135) | tapA | 2375193..2375954 (-) | 762 | WP_015384085.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NLK52_RS12140 (NLK52_12140) | yqzG | 2376224..2376550 (+) | 327 | WP_015384086.1 | YqzG/YhdC family protein | - |
| NLK52_RS12145 (NLK52_12145) | spoIITA | 2376592..2376771 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| NLK52_RS12150 (NLK52_12150) | comGG | 2376843..2377217 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| NLK52_RS12155 (NLK52_12155) | comGF | 2377218..2377601 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| NLK52_RS12160 (NLK52_12160) | comGE | 2377627..2377974 (-) | 348 | WP_015384088.1 | ComG operon protein 5 | Machinery gene |
| NLK52_RS12165 (NLK52_12165) | comGD | 2377958..2378389 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| NLK52_RS12170 (NLK52_12170) | comGC | 2378379..2378675 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| NLK52_RS12175 (NLK52_12175) | comGB | 2378689..2379726 (-) | 1038 | WP_015483430.1 | comG operon protein ComGB | Machinery gene |
| NLK52_RS12180 (NLK52_12180) | comGA | 2379713..2380783 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| NLK52_RS12185 (NLK52_12185) | corA | 2381193..2382146 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| NLK52_RS12190 (NLK52_12190) | yqhB | 2382289..2383617 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| NLK52_RS12195 (NLK52_12195) | rsbRD | 2383670..2384506 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39738.15 Da Isoelectric Point: 9.6257
>NTDB_id=705438 NLK52_RS12175 WP_015483430.1 2378689..2379726(-) (comGB) [Bacillus subtilis strain MEC_B298]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVLILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEVDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVLILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEVDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=705438 NLK52_RS12175 WP_015483430.1 2378689..2379726(-) (comGB) [Bacillus subtilis strain MEC_B298]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCCGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGCTCATTTTGTTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGTTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCCGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGCTCATTTTGTTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGTTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
96.904 |
93.623 |
0.907 |