Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NLK52_RS06075 Genome accession   NZ_CP100436
Coordinates   1176381..1176572 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain MEC_B298     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1171381..1181572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLK52_RS06045 (NLK52_06045) argF 1172244..1173203 (+) 960 WP_015383338.1 ornithine carbamoyltransferase -
  NLK52_RS06050 (NLK52_06050) yjzC 1173289..1173468 (+) 180 WP_003245356.1 YjzC family protein -
  NLK52_RS06055 (NLK52_06055) yjzD 1173514..1173699 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NLK52_RS06060 (NLK52_06060) - 1173950..1174684 (+) 735 WP_015483082.1 hypothetical protein -
  NLK52_RS06065 (NLK52_06065) - 1174766..1175323 (+) 558 WP_015383340.1 hypothetical protein -
  NLK52_RS06070 (NLK52_06070) med 1175413..1176366 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NLK52_RS06075 (NLK52_06075) comZ 1176381..1176572 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NLK52_RS06080 (NLK52_06080) yjzB 1176602..1176838 (-) 237 WP_015383342.1 spore coat protein YjzB -
  NLK52_RS06085 (NLK52_06085) fabH 1177003..1177941 (+) 939 WP_015483083.1 beta-ketoacyl-ACP synthase III -
  NLK52_RS06090 (NLK52_06090) fabF 1177964..1179205 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NLK52_RS06095 (NLK52_06095) yjaZ 1179281..1180066 (+) 786 WP_015383343.1 DUF2268 domain-containing protein -
  NLK52_RS06100 (NLK52_06100) appD 1180259..1181245 (+) 987 WP_015383344.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=705414 NLK52_RS06075 WP_003224559.1 1176381..1176572(+) (comZ) [Bacillus subtilis strain MEC_B298]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=705414 NLK52_RS06075 WP_003224559.1 1176381..1176572(+) (comZ) [Bacillus subtilis strain MEC_B298]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTGTTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1