Detailed information NTG0705413

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: NLK52_RS06070
• Genome accession: NZ_CP100436
• Coordinates: 1175413..1176366 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain MEC_B298
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1170413..1181366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLK52_RS06045 (NLK52_06045)	argF	1172244..1173203 (+)	960	WP_015383338.1	ornithine carbamoyltransferase	-
NLK52_RS06050 (NLK52_06050)	yjzC	1173289..1173468 (+)	180	WP_003245356.1	YjzC family protein	-
NLK52_RS06055 (NLK52_06055)	yjzD	1173514..1173699 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
NLK52_RS06060 (NLK52_06060)	-	1173950..1174684 (+)	735	WP_015483082.1	hypothetical protein	-
NLK52_RS06065 (NLK52_06065)	-	1174766..1175323 (+)	558	WP_015383340.1	hypothetical protein	-
NLK52_RS06070 (NLK52_06070)	med	1175413..1176366 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
NLK52_RS06075 (NLK52_06075)	comZ	1176381..1176572 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
NLK52_RS06080 (NLK52_06080)	yjzB	1176602..1176838 (-)	237	WP_015383342.1	spore coat protein YjzB	-
NLK52_RS06085 (NLK52_06085)	fabH	1177003..1177941 (+)	939	WP_015483083.1	beta-ketoacyl-ACP synthase III	-
NLK52_RS06090 (NLK52_06090)	fabF	1177964..1179205 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
NLK52_RS06095 (NLK52_06095)	yjaZ	1179281..1180066 (+)	786	WP_015383343.1	DUF2268 domain-containing protein	-
NLK52_RS06100 (NLK52_06100)	appD	1180259..1181245 (+)	987	WP_015383344.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=705413 NLK52_RS06070 WP_014476425.1 1175413..1176366(+) (med) [Bacillus subtilis strain MEC_B298]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=705413 NLK52_RS06070 WP_014476425.1 1175413..1176366(+) (med) [Bacillus subtilis strain MEC_B298]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACCTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997