Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NLY76_RS09235 Genome accession   NZ_CP100430
Coordinates   1905544..1906803 (-) Length   419 a.a.
NCBI ID   WP_044669609.1    Uniprot ID   -
Organism   Streptococcus suis strain LSS42     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1900544..1911803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLY76_RS09215 (NLY76_09215) dhaL 1901264..1901839 (+) 576 WP_024389198.1 dihydroxyacetone kinase subunit DhaL -
  NLY76_RS09220 (NLY76_09220) dhaM 1901836..1902210 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  NLY76_RS09225 (NLY76_09225) - 1902220..1902930 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  NLY76_RS09230 (NLY76_09230) - 1903257..1905119 (-) 1863 WP_044757491.1 proline--tRNA ligase -
  NLY76_RS09235 (NLY76_09235) eeP 1905544..1906803 (-) 1260 WP_044669609.1 RIP metalloprotease RseP Regulator
  NLY76_RS09240 (NLY76_09240) - 1906813..1907619 (-) 807 WP_024403231.1 phosphatidate cytidylyltransferase -
  NLY76_RS09245 (NLY76_09245) - 1907629..1908384 (-) 756 WP_044685637.1 isoprenyl transferase -
  NLY76_RS09250 (NLY76_09250) yajC 1908498..1908821 (-) 324 WP_013730587.1 preprotein translocase subunit YajC -
  NLY76_RS09255 (NLY76_09255) - 1908931..1910223 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44901.27 Da        Isoelectric Point: 5.6974

>NTDB_id=705226 NLY76_RS09235 WP_044669609.1 1905544..1906803(-) (eeP) [Streptococcus suis strain LSS42]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVIAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=705226 NLY76_RS09235 WP_044669609.1 1905544..1906803(-) (eeP) [Streptococcus suis strain LSS42]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGGCCAAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCAATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTATTGCTGAACAAGTAGATGGGGCCTATCGAATAGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCAACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTGTT
GGGGCTAATGGCTGCACTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654