Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   H7675_RS02535 Genome accession   NZ_AP023389
Coordinates   477137..478171 (+) Length   344 a.a.
NCBI ID   WP_031577431.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KUN-0012590     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 472137..483171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7675_RS02505 (KUN2590_04420) tsaE 473202..473663 (+) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H7675_RS02510 (KUN2590_04430) - 473638..474162 (+) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  H7675_RS02515 (KUN2590_04440) brpA 474171..475454 (+) 1284 WP_031488469.1 biofilm formation/cell division transcriptional regulator BrpA -
  H7675_RS02520 (KUN2590_04450) - 475565..475921 (-) 357 WP_031488470.1 hypothetical protein -
  H7675_RS02525 (KUN2590_04460) - 475918..476337 (-) 420 WP_002983376.1 HIT family protein -
  H7675_RS02530 (KUN2590_04470) pptA 476409..477134 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  H7675_RS02535 (KUN2590_04480) pptB 477137..478171 (+) 1035 WP_031577431.1 ABC transporter permease Regulator
  H7675_RS02540 (KUN2590_04490) ccrZ 478235..479026 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  H7675_RS02545 (KUN2590_04500) trmB 479026..479661 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7675_RS02555 (KUN2590_04510) rimP 479920..480456 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  H7675_RS02560 (KUN2590_04520) nusA 480631..481788 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  H7675_RS02565 (KUN2590_04530) rnpM 481804..482100 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  H7675_RS02570 (KUN2590_04540) - 482093..482395 (+) 303 WP_011285079.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40256.54 Da        Isoelectric Point: 10.3713

>NTDB_id=70447 H7675_RS02535 WP_031577431.1 477137..478171(+) (pptB) [Streptococcus pyogenes strain KUN-0012590]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISIKVKERAYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=70447 H7675_RS02535 WP_031577431.1 477137..478171(+) (pptB) [Streptococcus pyogenes strain KUN-0012590]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTATAAAAGTGAAAGAAAGAGCTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCCAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

43.023

100

0.43

  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43


Multiple sequence alignment