Detailed information NTG0070443

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EL335_RS01565
• Genome accession: NZ_AP018718
• Coordinates: 328328..329668 (+)
• Length: 446 a.a.
• NCBI ID: WP_126443925.1
• Uniprot ID: -
• Organism: Sulfuricystis multivorans strain J5B
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 323328..334668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL335_RS01550	-	323757..326315 (+)	2559	WP_126443922.1	EAL domain-containing protein	-
EL335_RS01555	-	326496..326726 (+)	231	WP_126443923.1	PP0621 family protein	-
EL335_RS01560	-	326727..328331 (+)	1605	WP_126443924.1	ATP-binding protein	-
EL335_RS01565	pilR	328328..329668 (+)	1341	WP_126443925.1	sigma-54 dependent transcriptional regulator	Regulator
EL335_RS01570	ampD	329652..330206 (+)	555	WP_126443926.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
EL335_RS01575	-	330414..330713 (+)	300	WP_126443927.1	hypothetical protein	-
EL335_RS01580	-	330725..331342 (+)	618	WP_126443928.1	histone H1-like repetitive region-containing protein	-
EL335_RS01585	-	331386..332546 (-)	1161	WP_126443929.1	pyridoxal phosphate-dependent aminotransferase	-
EL335_RS01590	-	332546..334357 (-)	1812	WP_126443930.1	phosphoenolpyruvate carboxykinase (GTP)	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49337.52 Da
• Isoelectric Point: 5.9926

>NTDB_id=70443 EL335_RS01565 WP_126443925.1 328328..329668(+) (pilR) [Sulfuricystis multivorans strain J5B]
MTPRVLIVDDEADIRELLDMTLARMGLECDSAASVAEAKRLLRERAYQLCLTDMRMPDGDGLQLVREIETHYPTLPVAVI
TAHGSTENAVAALKAGAFDYLAKPVSLAQLRTLVKSALTVPESMPEREPRGRELLGHSPAIVQVRELIGKVAKSEAPVYI
SGESGSGKELAARLIHQGSRRRDKPFIAVNCGAIPENLMESEFFGYRKGAFTGADSEREGFFQAADGGTLFLDEVADLPF
PMQVKLLRAIQEKRVRRVGATNEEPVNVRIICATHQDLRQLMEAGRFRQDLFFRLNVIEIHMPALRECREDVPEFTQRIL
ERLAAANGVPAPRLTSRAMAALTAYDFPGNVRELENILERALALHGGDTIDSEDLQLQPPKVGGAETAGIGGKPLQEFLD
EQERQAILDALQKTRYNRTAAARLLGVTFRSLRYRMERLGLNESAG

Nucleotide

• Length: 1341 bp

>NTDB_id=70443 EL335_RS01565 WP_126443925.1 328328..329668(+) (pilR) [Sulfuricystis multivorans strain J5B]
ATGACTCCGAGAGTACTGATCGTCGATGACGAAGCAGACATCCGCGAGTTGCTCGACATGACCTTGGCACGCATGGGGCT
CGAATGCGACAGCGCCGCCAGCGTCGCCGAGGCCAAGCGGCTGTTGCGCGAACGAGCCTACCAGCTGTGCCTGACCGACA
TGCGCATGCCCGATGGCGACGGTCTGCAATTGGTGCGCGAGATCGAGACCCATTATCCGACGTTGCCGGTGGCGGTGATC
ACCGCGCATGGCAGCACCGAGAATGCCGTTGCGGCGCTCAAGGCCGGCGCGTTCGACTATCTTGCCAAGCCGGTGTCACT
CGCCCAGCTGCGCACGCTGGTGAAATCCGCGCTCACCGTTCCCGAGAGCATGCCGGAGAGAGAGCCACGCGGCCGGGAGC
TGCTCGGCCATTCGCCGGCGATCGTCCAGGTACGCGAGCTGATCGGTAAGGTGGCGAAGAGCGAAGCGCCCGTCTATATC
TCGGGCGAATCCGGCAGCGGCAAGGAGCTCGCGGCCCGGCTGATCCACCAGGGTAGCCGTCGGCGGGACAAGCCGTTCAT
CGCGGTCAACTGCGGCGCGATCCCGGAAAACCTGATGGAAAGCGAATTCTTCGGTTATCGCAAGGGGGCATTCACGGGTG
CCGACAGCGAGCGCGAAGGATTTTTCCAGGCGGCCGACGGCGGCACGCTATTTCTCGACGAAGTTGCCGATTTGCCGTTT
CCGATGCAGGTGAAGCTATTGCGCGCGATCCAGGAAAAACGCGTGCGGCGCGTCGGCGCGACGAACGAAGAGCCGGTCAA
TGTGCGCATCATCTGTGCAACGCATCAGGATTTGCGCCAGCTGATGGAAGCTGGGCGCTTCCGTCAGGATCTGTTCTTCC
GGCTCAACGTGATCGAGATTCACATGCCAGCCTTGCGTGAATGCCGCGAGGATGTGCCCGAATTCACGCAGCGCATCCTG
GAGAGGCTTGCCGCTGCCAATGGCGTGCCAGCGCCGCGACTCACCTCTCGGGCGATGGCTGCGCTGACGGCTTACGACTT
TCCCGGCAATGTGCGTGAGCTGGAAAATATCCTCGAACGGGCGCTCGCCCTGCATGGCGGCGACACCATCGACAGCGAGG
ATTTGCAATTGCAGCCACCGAAAGTCGGCGGTGCCGAGACGGCAGGCATCGGCGGCAAGCCTCTGCAGGAGTTCCTCGAC
GAACAGGAACGCCAGGCGATTCTCGATGCGTTGCAAAAAACCCGTTACAACCGCACGGCAGCCGCCCGTTTGCTGGGTGT
GACCTTCCGCTCGCTGCGTTACCGGATGGAGCGGCTGGGGCTCAATGAATCCGCTGGCTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Bacterial regulatory protein, Fis family (HTH_8) (399-438)

• Sigma-54 interaction domain (Sigma54_activat) (134-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.788	99.327	0.574
pilR	Acinetobacter baumannii strain A118	45.553	100	0.471