Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   NKZ81_RS08795 Genome accession   NZ_CP100328
Coordinates   1749471..1750520 (-) Length   349 a.a.
NCBI ID   WP_012775295.1    Uniprot ID   A0A2K1T047
Organism   Streptococcus suis strain STC86     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1744471..1755520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NKZ81_RS08775 (NKZ81_08775) trpB 1744787..1745962 (-) 1176 WP_204101559.1 tryptophan synthase subunit beta -
  NKZ81_RS08780 (NKZ81_08780) - 1746997..1747524 (-) 528 WP_002942846.1 VanZ family protein -
  NKZ81_RS08785 (NKZ81_08785) rlmN 1747521..1748633 (-) 1113 WP_012028433.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  NKZ81_RS08790 (NKZ81_08790) - 1748642..1749283 (-) 642 WP_014638483.1 YutD-like domain-containing protein -
  NKZ81_RS08795 (NKZ81_08795) sepM 1749471..1750520 (-) 1050 WP_012775295.1 SepM family pheromone-processing serine protease Regulator
  NKZ81_RS08800 (NKZ81_08800) coaD 1750507..1750995 (-) 489 WP_015647233.1 pantetheine-phosphate adenylyltransferase -
  NKZ81_RS08805 (NKZ81_08805) rsmD 1750985..1751524 (-) 540 WP_024388284.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NKZ81_RS08810 (NKZ81_08810) - 1751831..1752553 (-) 723 WP_044684680.1 hypothetical protein -
  NKZ81_RS08815 (NKZ81_08815) - 1752610..1752996 (-) 387 WP_004194735.1 rhodanese-like domain-containing protein -
  NKZ81_RS08820 (NKZ81_08820) - 1752996..1753214 (-) 219 WP_041179287.1 YqgQ family protein -
  NKZ81_RS08825 (NKZ81_08825) - 1753522..1754124 (-) 603 WP_015647237.1 response regulator transcription factor -
  NKZ81_RS08830 (NKZ81_08830) - 1754121..1755215 (-) 1095 WP_044684682.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37761.83 Da        Isoelectric Point: 4.6112

>NTDB_id=704345 NKZ81_RS08795 WP_012775295.1 1749471..1750520(-) (sepM) [Streptococcus suis strain STC86]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIARFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALTDDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLEVGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=704345 NKZ81_RS08795 WP_012775295.1 1749471..1750520(-) (sepM) [Streptococcus suis strain STC86]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAGGAGTATTTCCGTATAGCACGGTTTTACAT
GGAAACTTCGCAAAATATGGCGAAGTATCAAGGATTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTGCTTGCCTTGACGGATGATTCAACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAGGTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGAATAGGCATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACAGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGGATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTCATTTCGGCAGCTAAGTCTGGTGCAAGTATCTTTTTTG
TACCAAACAATCCAGTTGATGTAGAAGTTTTGAAGAAAAACCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCA
GCCGAGAAAGCAGGTCTAGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACAAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K1T047

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.807

99.427

0.605