Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | VRUMOI_RS10495 | Genome accession | NZ_AP018685 |
| Coordinates | 2302401..2303009 (+) | Length | 202 a.a. |
| NCBI ID | WP_089138454.1 | Uniprot ID | - |
| Organism | Vibrio rumoiensis strain FERM P-14531 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2297401..2308009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VRUMOI_RS10470 | panC | 2297941..2298828 (+) | 888 | WP_089138459.1 | pantoate--beta-alanine ligase | - |
| VRUMOI_RS10475 | - | 2298924..2299694 (-) | 771 | WP_089138458.1 | ABC transporter permease | - |
| VRUMOI_RS10480 | - | 2299694..2300647 (-) | 954 | WP_089138457.1 | ABC transporter ATP-binding protein | - |
| VRUMOI_RS10485 | can | 2300741..2301412 (+) | 672 | WP_089138456.1 | carbonate dehydratase | - |
| VRUMOI_RS10490 | hpt | 2301564..2302094 (-) | 531 | WP_089138455.1 | hypoxanthine phosphoribosyltransferase | - |
| VRUMOI_RS10495 | opaR | 2302401..2303009 (+) | 609 | WP_089138454.1 | TetR/AcrR family transcriptional regulator | Regulator |
| VRUMOI_RS10500 | lpdA | 2303121..2304548 (-) | 1428 | WP_089138453.1 | dihydrolipoyl dehydrogenase | - |
| VRUMOI_RS10505 | aceF | 2304824..2306713 (-) | 1890 | WP_089138452.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23398.82 Da Isoelectric Point: 6.7500
>NTDB_id=70372 VRUMOI_RS10495 WP_089138454.1 2302401..2303009(+) (opaR) [Vibrio rumoiensis strain FERM P-14531]
MDMITKRPRTRLNPEKRKQQLLDIGIEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDAVLSDVEQHFSRFIT
DNINPDLPVKTNLQALSVQLIDIVLDDTQWIKIWFEWSTSTREDVWPLFVATHGQHQKFFKDLFSDAIEKGELCNDHKPG
NISKLFHGICYSIFVQANRRPDKEYLTQLVTSFLDMLCIYKK
MDMITKRPRTRLNPEKRKQQLLDIGIEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDAVLSDVEQHFSRFIT
DNINPDLPVKTNLQALSVQLIDIVLDDTQWIKIWFEWSTSTREDVWPLFVATHGQHQKFFKDLFSDAIEKGELCNDHKPG
NISKLFHGICYSIFVQANRRPDKEYLTQLVTSFLDMLCIYKK
Nucleotide
Download Length: 609 bp
>NTDB_id=70372 VRUMOI_RS10495 WP_089138454.1 2302401..2303009(+) (opaR) [Vibrio rumoiensis strain FERM P-14531]
ATGGATATGATAACAAAACGCCCAAGGACTCGGTTAAATCCTGAGAAAAGAAAACAGCAACTGCTCGATATTGGTATCGA
AGTATTTGCTCGTCGTGGTATTGGTCGAGGCGGTCATGCTGATATTGCCGAAATCGCTCAAGTCTCTGTCGCGACAGTGT
TTAATTACTTCCCTACTCGTGAAGATTTAGTTGATGCAGTATTAAGCGATGTCGAACAACATTTTTCTCGCTTTATCACT
GACAACATCAACCCTGACCTTCCAGTCAAAACGAATCTACAAGCATTATCAGTACAATTAATCGATATCGTGCTTGATGA
TACACAATGGATAAAAATTTGGTTTGAATGGAGTACCTCCACCCGAGAAGATGTTTGGCCACTTTTTGTAGCCACTCACG
GTCAGCACCAGAAGTTTTTCAAAGATCTATTTTCTGATGCCATTGAAAAGGGTGAATTATGCAATGACCATAAACCTGGA
AACATTTCTAAACTGTTTCATGGCATCTGTTATTCTATTTTTGTCCAAGCTAATCGACGCCCCGACAAAGAATACCTAAC
TCAACTGGTGACAAGCTTTTTAGATATGCTGTGCATTTATAAAAAATAA
ATGGATATGATAACAAAACGCCCAAGGACTCGGTTAAATCCTGAGAAAAGAAAACAGCAACTGCTCGATATTGGTATCGA
AGTATTTGCTCGTCGTGGTATTGGTCGAGGCGGTCATGCTGATATTGCCGAAATCGCTCAAGTCTCTGTCGCGACAGTGT
TTAATTACTTCCCTACTCGTGAAGATTTAGTTGATGCAGTATTAAGCGATGTCGAACAACATTTTTCTCGCTTTATCACT
GACAACATCAACCCTGACCTTCCAGTCAAAACGAATCTACAAGCATTATCAGTACAATTAATCGATATCGTGCTTGATGA
TACACAATGGATAAAAATTTGGTTTGAATGGAGTACCTCCACCCGAGAAGATGTTTGGCCACTTTTTGTAGCCACTCACG
GTCAGCACCAGAAGTTTTTCAAAGATCTATTTTCTGATGCCATTGAAAAGGGTGAATTATGCAATGACCATAAACCTGGA
AACATTTCTAAACTGTTTCATGGCATCTGTTATTCTATTTTTGTCCAAGCTAATCGACGCCCCGACAAAGAATACCTAAC
TCAACTGGTGACAAGCTTTTTAGATATGCTGTGCATTTATAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
59.901 |
100 |
0.599 |
| hapR | Vibrio cholerae C6706 |
60.606 |
98.02 |
0.594 |
| hapR | Vibrio cholerae strain A1552 |
60.606 |
98.02 |
0.594 |