Detailed information NTG0703397

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NHG72_RS08140
• Genome accession: NZ_CP100041
• Coordinates: 1719687..1720835 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1714687..1725835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NHG72_RS08110 (NHG72_08105)	-	1714823..1715581 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
NHG72_RS08115 (NHG72_08110)	-	1715575..1716522 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
NHG72_RS08120 (NHG72_08115)	ceuB	1716512..1717465 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
NHG72_RS08125 (NHG72_08120)	-	1717879..1719243 (+)	1365	WP_007609394.1	aspartate kinase	-
NHG72_RS08130 (NHG72_08125)	-	1719338..1719433 (+)	96	WP_021495118.1	YjcZ family sporulation protein	-
NHG72_RS08135 (NHG72_08130)	phrC	1719584..1719703 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NHG72_RS08140 (NHG72_08135)	rapC	1719687..1720835 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
NHG72_RS08145 (NHG72_08140)	-	1720988..1722421 (-)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
NHG72_RS08150 (NHG72_08145)	-	1722408..1723091 (-)	684	WP_032872879.1	response regulator transcription factor	-
NHG72_RS08155 (NHG72_08150)	-	1723304..1724734 (+)	1431	WP_032872876.1	ABC transporter permease	-
NHG72_RS08160 (NHG72_08155)	-	1724749..1725432 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=703397 NHG72_RS08140 WP_007410270.1 1719687..1720835(-) (rapC) [Bacillus velezensis strain B3]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=703397 NHG72_RS08140 WP_007410270.1 1719687..1720835(-) (rapC) [Bacillus velezensis strain B3]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568