Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PCS96_RS20155 | Genome accession | NZ_CP115330 |
| Coordinates | 4185066..4186046 (+) | Length | 326 a.a. |
| NCBI ID | WP_001327409.1 | Uniprot ID | - |
| Organism | Escherichia coli strain CUVET16-394 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4180066..4191046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCS96_RS20125 (PCS96_20070) | yggM | 4180667..4181674 (+) | 1008 | WP_000745192.1 | DUF1202 family protein | - |
| PCS96_RS20130 (PCS96_20075) | hemW | 4181743..4182879 (-) | 1137 | WP_000239981.1 | radical SAM family heme chaperone HemW | - |
| PCS96_RS20135 (PCS96_20080) | rdgB | 4182872..4183465 (-) | 594 | WP_001174738.1 | XTP/dITP diphosphatase | - |
| PCS96_RS20140 (PCS96_20085) | yggU | 4183473..4183763 (-) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| PCS96_RS20145 (PCS96_20090) | yggT | 4183760..4184326 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| PCS96_RS20150 (PCS96_20095) | yggS | 4184344..4185048 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| PCS96_RS20155 (PCS96_20100) | pilT | 4185066..4186046 (+) | 981 | WP_001327409.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PCS96_RS20160 (PCS96_20105) | ruvX | 4186220..4186636 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| PCS96_RS20165 (PCS96_20110) | yqgE | 4186636..4187199 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| PCS96_RS20170 (PCS96_20115) | gshB | 4187308..4188258 (-) | 951 | WP_000593261.1 | glutathione synthase | - |
| PCS96_RS20175 (PCS96_20120) | rsmE | 4188271..4189002 (-) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| PCS96_RS20180 (PCS96_20125) | endA | 4189082..4189789 (-) | 708 | WP_001327408.1 | deoxyribonuclease I | - |
| PCS96_RS20185 (PCS96_20130) | yggI | 4189884..4190381 (-) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 36089.34 Da Isoelectric Point: 5.9975
>NTDB_id=703395 PCS96_RS20155 WP_001327409.1 4185066..4186046(+) (pilT) [Escherichia coli strain CUVET16-394]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDALDVEELLREWLDDDQRTILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYTSQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VKEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDALDVEELLREWLDDDQRTILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYTSQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VKEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=703395 PCS96_RS20155 WP_001327409.1 4185066..4186046(+) (pilT) [Escherichia coli strain CUVET16-394]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCGAATGGAAGCTGCGCCGTTTGATGCGCTGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGACAATATTGCTGGAGAATGGTCAGTTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATACCAGTCAGCGATGTTTGATCCAACAGCGGGAGATTGGTTTGCACTGTATGACTTTCGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGATAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCG
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTACTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGAAAGAAGGGCGCTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCGAATGGAAGCTGCGCCGTTTGATGCGCTGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGACAATATTGCTGGAGAATGGTCAGTTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATACCAGTCAGCGATGTTTGATCCAACAGCGGGAGATTGGTTTGCACTGTATGACTTTCGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGATAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCG
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTACTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGAAAGAAGGGCGCTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.