Detailed information NTG0703281

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: NHN23_RS06545
• Genome accession: NZ_CP099990
• Coordinates: 1339507..1340481 (+)
• Length: 324 a.a.
• NCBI ID: WP_021339253.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain PU1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1334507..1345481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NHN23_RS06515	-	1334688..1335227 (+)	540	WP_021339257.1	5-formyltetrahydrofolate cyclo-ligase	-
NHN23_RS06520	-	1335242..1336699 (+)	1458	WP_021339256.1	rhomboid family intramembrane serine protease	-
NHN23_RS06525	-	1336683..1336883 (+)	201	WP_002512453.1	YqgQ family protein	-
NHN23_RS06530	-	1337473..1338459 (+)	987	WP_021339255.1	glucokinase	-
NHN23_RS06535	-	1338459..1338782 (+)	324	WP_021339254.1	MTH1187 family thiamine-binding protein	-
NHN23_RS06540	-	1338784..1339407 (+)	624	WP_002507502.1	MBL fold metallo-hydrolase	-
NHN23_RS06545	comGA	1339507..1340481 (+)	975	WP_021339253.1	competence type IV pilus ATPase ComGA	Machinery gene
NHN23_RS06550	comGB	1340453..1341520 (+)	1068	WP_021339252.1	competence type IV pilus assembly protein ComGB	-
NHN23_RS06555	comGC	1341536..1341862 (+)	327	WP_253345714.1	competence type IV pilus major pilin ComGC	Machinery gene
NHN23_RS06560	comGD	1341843..1342286 (+)	444	WP_253345727.1	competence type IV pilus minor pilin ComGD	-
NHN23_RS06565	comGF	1342273..1342986 (+)	714	WP_253345716.1	competence type IV pilus minor pilin ComGF	-
NHN23_RS06570	-	1343151..1343666 (+)	516	WP_021339247.1	shikimate kinase	-
NHN23_RS06575	gcvT	1343845..1344936 (+)	1092	WP_021339246.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37344.44 Da
• Isoelectric Point: 9.0566

>NTDB_id=703281 NHN23_RS06545 WP_021339253.1 1339507..1340481(+) (comGA) [Staphylococcus equorum strain PU1]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=703281 NHN23_RS06545 WP_021339253.1 1339507..1340481(+) (comGA) [Staphylococcus equorum strain PU1]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	61.111	100	0.611
comGA	Staphylococcus aureus N315	61.111	100	0.611