Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NG812_RS09390 Genome accession   NZ_CP099987
Coordinates   1906299..1907546 (-) Length   415 a.a.
NCBI ID   WP_014025467.1    Uniprot ID   A0AA43PEA3
Organism   Lactococcus garvieae strain FUA009     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1901299..1912546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NG812_RS09380 - 1902878..1903693 (-) 816 Protein_1817 PolC-type DNA polymerase III N-terminal domain-containing protein -
  NG812_RS09385 (NG812_09345) - 1904422..1906272 (-) 1851 WP_003133504.1 proline--tRNA ligase -
  NG812_RS09390 (NG812_09350) eeP 1906299..1907546 (-) 1248 WP_014025467.1 RIP metalloprotease RseP Regulator
  NG812_RS09395 (NG812_09355) - 1907722..1908516 (-) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  NG812_RS09400 (NG812_09360) - 1908513..1909250 (-) 738 WP_003133511.1 isoprenyl transferase -
  NG812_RS09405 (NG812_09365) yajC 1909450..1909785 (-) 336 WP_165706241.1 preprotein translocase subunit YajC -
  NG812_RS09410 (NG812_09370) - 1909860..1910507 (-) 648 WP_270253003.1 DNA alkylation repair protein -
  NG812_RS09415 (NG812_09375) rlmH 1910504..1910983 (-) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NG812_RS09420 (NG812_09380) htrA 1911287..1912504 (+) 1218 WP_003133516.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45097.57 Da        Isoelectric Point: 5.8048

>NTDB_id=703210 NG812_RS09390 WP_014025467.1 1906299..1907546(-) (eeP) [Lactococcus garvieae strain FUA009]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=703210 NG812_RS09390 WP_014025467.1 1906299..1907546(-) (eeP) [Lactococcus garvieae strain FUA009]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGCACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGAGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATCGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTTCAATCGGGTACCCCTGCTT
ATTCAGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCGTCGAAGACACTAGAGCTCAAACC
GGAAAAAATTGACGGAAGATATCGTATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGCCCCGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGCCTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGGAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566