Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PCP34_RS22850 Genome accession   NZ_CP115299
Coordinates   4905113..4905520 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain 20     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4900113..4910520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PCP34_RS22830 (PCP34_22815) pilK 4901046..4901921 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  PCP34_RS22835 (PCP34_22820) pilJ 4901982..4904030 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  PCP34_RS22840 (PCP34_22825) - 4904115..4904650 (-) 536 Protein_4502 chemotaxis protein CheW -
  PCP34_RS22845 (PCP34_22830) pilH 4904701..4905066 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PCP34_RS22850 (PCP34_22835) pilG 4905113..4905520 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PCP34_RS22855 (PCP34_22840) gshB 4905775..4906728 (+) 954 WP_023518290.1 glutathione synthase -
  PCP34_RS22860 (PCP34_22845) - 4906875..4907768 (+) 894 WP_023518289.1 energy transducer TonB -
  PCP34_RS22865 (PCP34_22850) - 4907817..4908386 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  PCP34_RS22870 (PCP34_22855) ruvX 4908386..4908820 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PCP34_RS22875 (PCP34_22860) pyrR 4908932..4909444 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PCP34_RS22880 (PCP34_22865) - 4909468..4910472 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=703044 PCP34_RS22850 WP_003084583.1 4905113..4905520(-) (pilG) [Pseudomonas aeruginosa strain 20]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=703044 PCP34_RS22850 WP_003084583.1 4905113..4905520(-) (pilG) [Pseudomonas aeruginosa strain 20]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385