Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   KUN2590_RS02095 Genome accession   NZ_AP023387
Coordinates   406193..407227 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain NIH34     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 401193..412227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KUN2590_RS02065 (SPNIH34_03540) tsaE 402258..402719 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  KUN2590_RS02070 (SPNIH34_03550) - 402694..403218 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  KUN2590_RS02075 (SPNIH34_03560) brpA 403227..404510 (+) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  KUN2590_RS02080 (SPNIH34_03570) - 404621..404977 (-) 357 WP_002988657.1 hypothetical protein -
  KUN2590_RS02085 (SPNIH34_03580) - 404974..405393 (-) 420 WP_002983376.1 HIT family protein -
  KUN2590_RS02090 (SPNIH34_03590) pptA 405465..406190 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  KUN2590_RS02095 (SPNIH34_03600) pptB 406193..407227 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  KUN2590_RS02100 (SPNIH34_03610) ccrZ 407291..408082 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  KUN2590_RS02105 (SPNIH34_03620) trmB 408082..408717 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KUN2590_RS02115 (SPNIH34_03630) rimP 408976..409512 (+) 537 WP_011054929.1 ribosome maturation factor RimP -
  KUN2590_RS02120 (SPNIH34_03640) nusA 409687..410844 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  KUN2590_RS02125 (SPNIH34_03650) rnpM 410860..411156 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  KUN2590_RS02130 (SPNIH34_03660) - 411149..411451 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=70255 KUN2590_RS02095 WP_010922583.1 406193..407227(+) (pptB) [Streptococcus pyogenes strain NIH34]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=70255 KUN2590_RS02095 WP_010922583.1 406193..407227(+) (pptB) [Streptococcus pyogenes strain NIH34]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment