Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JMUB898_RS01550 Genome accession   NZ_AP018587
Coordinates   358017..358682 (+) Length   221 a.a.
NCBI ID   WP_002444548.1    Uniprot ID   A0A1S1GW19
Organism   Staphylococcus caprae strain JMUB898     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 353017..363682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMUB898_RS01530 (JMUB898_0306) - 353198..353818 (+) 621 WP_002444559.1 acetyltransferase -
  JMUB898_RS01535 (JMUB898_0307) - 353824..354969 (+) 1146 WP_269471254.1 DegT/DnrJ/EryC1/StrS aminotransferase family protein -
  JMUB898_RS01540 (JMUB898_0308) - 354973..355914 (+) 942 WP_002444555.1 LCP family protein -
  JMUB898_RS01545 (JMUB898_0309) - 356015..357499 (-) 1485 WP_037541814.1 alkaline phosphatase -
  JMUB898_RS12630 (JMUB898_0310) - 357833..357985 (+) 153 WP_165764690.1 hypothetical protein -
  JMUB898_RS01550 (JMUB898_0311) braR 358017..358682 (+) 666 WP_002444548.1 response regulator transcription factor Regulator
  JMUB898_RS01555 (JMUB898_0312) braS 358688..359584 (+) 897 WP_126501886.1 sensor histidine kinase Regulator
  JMUB898_RS01560 (JMUB898_0313) - 359695..360444 (+) 750 WP_037541718.1 ABC transporter ATP-binding protein -
  JMUB898_RS01565 (JMUB898_0314) - 360446..362455 (+) 2010 WP_037541716.1 ABC transporter permease -
  JMUB898_RS01570 (JMUB898_0315) - 362595..363332 (+) 738 WP_002444541.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25509.55 Da        Isoelectric Point: 4.6277

>NTDB_id=70191 JMUB898_RS01550 WP_002444548.1 358017..358682(+) (braR) [Staphylococcus caprae strain JMUB898]
MKILIVEDDLVIAESLANELSKWNYDVKVVENFDKIMEDFHEMDPQLVLLDINLPTLNGFHWCQEMRKVSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLIKEGEAVQLSLTELQILK
MLFQNEGKYVSRTTLIEKCWESENFIDDNTLAVNMTRLRKKLSSIGVDHFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=70191 JMUB898_RS01550 WP_002444548.1 358017..358682(+) (braR) [Staphylococcus caprae strain JMUB898]
ATGAAGATTCTCATTGTAGAAGACGACTTAGTGATTGCTGAAAGCTTGGCGAATGAATTGTCAAAATGGAACTACGACGT
AAAAGTGGTTGAGAATTTTGACAAAATCATGGAAGATTTTCATGAAATGGATCCGCAGCTTGTCTTATTAGACATTAATT
TGCCCACGCTTAATGGCTTTCATTGGTGTCAAGAAATGCGCAAAGTATCCAACGTCCCTATTATGTTTATAAGTTCGCGT
ACGGATAATATGGATCAAATTATGGCAATTCAAATGGGTGGCGATGATTTTATTGAGAAGCCGTTCAACTTATCGTTAAC
CATCGCAAAGATCCAAGCTTTGCTACGACGAACATACGACCTATCAGTATCTAATGACGAATTGGATGTGAAAGGCTGTA
AACTTATCCTTGATGAAGCAAAACTAATTAAGGAAGGCGAAGCGGTTCAATTATCACTAACAGAACTTCAAATTCTGAAA
ATGCTGTTCCAAAATGAAGGTAAATATGTAAGTCGTACAACTTTAATTGAAAAATGTTGGGAATCTGAAAACTTCATCGA
TGACAATACATTAGCAGTAAATATGACACGATTACGTAAAAAATTATCATCTATCGGTGTGGATCATTTTATAGAAACAA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S1GW19

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

82.353

100

0.824

Multiple sequence alignment