Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL289_RS04315 | Genome accession | NZ_AP018586 |
| Coordinates | 921072..921467 (+) | Length | 131 a.a. |
| NCBI ID | WP_126501915.1 | Uniprot ID | - |
| Organism | Staphylococcus caprae strain JMUB590 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 916072..926467
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL289_RS04285 (JMUB590_0862) | atpD | 916306..917718 (+) | 1413 | WP_002445568.1 | F0F1 ATP synthase subunit beta | - |
| EL289_RS04290 (JMUB590_0863) | - | 917738..918142 (+) | 405 | WP_002445567.1 | F0F1 ATP synthase subunit epsilon | - |
| EL289_RS04295 (JMUB590_0864) | - | 918292..918525 (+) | 234 | WP_037541859.1 | DUF1146 family protein | - |
| EL289_RS04300 (JMUB590_0865) | murA | 918635..919900 (+) | 1266 | WP_044466358.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EL289_RS04305 (JMUB590_0866) | fabZ | 919942..920379 (+) | 438 | WP_002445561.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EL289_RS04310 (JMUB590_0867) | - | 920436..920879 (-) | 444 | WP_037541858.1 | YwpF-like family protein | - |
| EL289_RS04315 (JMUB590_0868) | ssb | 921072..921467 (+) | 396 | WP_126501915.1 | single-stranded DNA-binding protein | Machinery gene |
| EL289_RS04320 (JMUB590_0869) | - | 921859..922581 (+) | 723 | WP_002445556.1 | transglycosylase family protein | - |
| EL289_RS04325 (JMUB590_0870) | tenA | 922880..923569 (+) | 690 | WP_002445555.1 | thiaminase II | - |
| EL289_RS04330 (JMUB590_0871) | thiD | 923562..924383 (+) | 822 | WP_037541857.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL289_RS04335 (JMUB590_0872) | thiM | 924376..925170 (+) | 795 | WP_002445553.1 | hydroxyethylthiazole kinase | - |
| EL289_RS04340 (JMUB590_0873) | thiE | 925171..925809 (+) | 639 | WP_002445552.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15142.96 Da Isoelectric Point: 5.0119
>NTDB_id=70160 EL289_RS04315 WP_126501915.1 921072..921467(+) (ssb) [Staphylococcus caprae strain JMUB590]
MLNKIVIVGRLTKDAQIYEKEDSRVATFCVATERNYKDENNEVSSDYLLCKAFGKTATNIEKYTSQATLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKSNEIISQNQFDEDTYHSDEFETINI
MLNKIVIVGRLTKDAQIYEKEDSRVATFCVATERNYKDENNEVSSDYLLCKAFGKTATNIEKYTSQATLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKSNEIISQNQFDEDTYHSDEFETINI
Nucleotide
Download Length: 396 bp
>NTDB_id=70160 EL289_RS04315 WP_126501915.1 921072..921467(+) (ssb) [Staphylococcus caprae strain JMUB590]
ATGTTAAATAAAATAGTAATTGTTGGTAGGTTAACTAAAGATGCCCAAATATATGAAAAGGAGGATAGTAGAGTTGCAAC
GTTTTGTGTAGCAACAGAAAGAAATTACAAAGACGAAAATAATGAAGTTTCGAGCGACTATTTACTGTGTAAGGCATTTG
GTAAAACAGCTACGAATATTGAAAAATATACCAGTCAAGCTACTTTAGTAGGGATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGGCAAACACATTTTGTAACCGAACTATATGTAGAAACGATTAAATTCATGTCTCCCAAAACAAAAAG
TAACGAAATTATCTCTCAAAATCAATTTGACGAAGACACTTATCACTCAGACGAATTTGAAACTATCAATATATAA
ATGTTAAATAAAATAGTAATTGTTGGTAGGTTAACTAAAGATGCCCAAATATATGAAAAGGAGGATAGTAGAGTTGCAAC
GTTTTGTGTAGCAACAGAAAGAAATTACAAAGACGAAAATAATGAAGTTTCGAGCGACTATTTACTGTGTAAGGCATTTG
GTAAAACAGCTACGAATATTGAAAAATATACCAGTCAAGCTACTTTAGTAGGGATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGGCAAACACATTTTGTAACCGAACTATATGTAGAAACGATTAAATTCATGTCTCCCAAAACAAAAAG
TAACGAAATTATCTCTCAAAATCAATTTGACGAAGACACTTATCACTCAGACGAATTTGAAACTATCAATATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |