Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PCP35_RS27175 Genome accession   NZ_CP115278
Coordinates   5789838..5790245 (-) Length   135 a.a.
NCBI ID   WP_034023456.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain F011     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5784838..5795245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PCP35_RS27155 (PCP35_27145) pilK 5785770..5786645 (-) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -
  PCP35_RS27160 (PCP35_27150) pilJ 5786706..5788754 (-) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  PCP35_RS27165 (PCP35_27155) - 5788839..5789375 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  PCP35_RS27170 (PCP35_27160) pilH 5789426..5789791 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PCP35_RS27175 (PCP35_27165) pilG 5789838..5790245 (-) 408 WP_034023456.1 twitching motility response regulator PilG Regulator
  PCP35_RS27180 (PCP35_27170) gshB 5790500..5791453 (+) 954 WP_003100943.1 glutathione synthase -
  PCP35_RS27185 (PCP35_27175) - 5791600..5792493 (+) 894 WP_003084580.1 TonB family protein -
  PCP35_RS27190 (PCP35_27180) - 5792542..5793111 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  PCP35_RS27195 (PCP35_27185) ruvX 5793111..5793545 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PCP35_RS27200 (PCP35_27190) pyrR 5793657..5794169 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PCP35_RS27205 (PCP35_27195) - 5794193..5795197 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14748.14 Da        Isoelectric Point: 7.1340

>NTDB_id=701522 PCP35_RS27175 WP_034023456.1 5789838..5790245(-) (pilG) [Pseudomonas aeruginosa strain F011]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=701522 PCP35_RS27175 WP_034023456.1 5789838..5790245(-) (pilG) [Pseudomonas aeruginosa strain F011]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGACACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

43.59

86.667

0.378