Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL290_RS04385 | Genome accession | NZ_AP018585 |
| Coordinates | 931909..932304 (+) | Length | 131 a.a. |
| NCBI ID | WP_002445557.1 | Uniprot ID | A0A1J3ZZ23 |
| Organism | Staphylococcus caprae strain JMUB145 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 926909..937304
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL290_RS04355 (JMUB145_0884) | atpD | 927143..928555 (+) | 1413 | WP_002445568.1 | F0F1 ATP synthase subunit beta | - |
| EL290_RS04360 (JMUB145_0885) | - | 928575..928979 (+) | 405 | WP_002445567.1 | F0F1 ATP synthase subunit epsilon | - |
| EL290_RS04365 (JMUB145_0886) | - | 929129..929362 (+) | 234 | WP_037541859.1 | DUF1146 family protein | - |
| EL290_RS04370 (JMUB145_0887) | murA | 929472..930737 (+) | 1266 | WP_126493717.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EL290_RS04375 (JMUB145_0888) | fabZ | 930779..931216 (+) | 438 | WP_002445561.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EL290_RS04380 (JMUB145_0889) | - | 931273..931716 (-) | 444 | WP_037541858.1 | YwpF-like family protein | - |
| EL290_RS04385 (JMUB145_0890) | ssb | 931909..932304 (+) | 396 | WP_002445557.1 | single-stranded DNA-binding protein | Machinery gene |
| EL290_RS04390 (JMUB145_0891) | - | 932696..933418 (+) | 723 | WP_002445556.1 | transglycosylase family protein | - |
| EL290_RS04395 (JMUB145_0892) | tenA | 933717..934406 (+) | 690 | WP_002445555.1 | thiaminase II | - |
| EL290_RS04400 (JMUB145_0893) | thiD | 934399..935220 (+) | 822 | WP_037541857.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL290_RS04405 (JMUB145_0894) | thiM | 935213..936007 (+) | 795 | WP_002445553.1 | hydroxyethylthiazole kinase | - |
| EL290_RS04410 (JMUB145_0895) | thiE | 936008..936646 (+) | 639 | WP_002445552.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15128.93 Da Isoelectric Point: 5.0119
>NTDB_id=70124 EL290_RS04385 WP_002445557.1 931909..932304(+) (ssb) [Staphylococcus caprae strain JMUB145]
MLNKIVIVGRLTKDAQIYEKEDSRVATFCVATERNYKDENNEVSSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKSNEIISQNQFDEDTYHSDEFETINI
MLNKIVIVGRLTKDAQIYEKEDSRVATFCVATERNYKDENNEVSSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKSNEIISQNQFDEDTYHSDEFETINI
Nucleotide
Download Length: 396 bp
>NTDB_id=70124 EL290_RS04385 WP_002445557.1 931909..932304(+) (ssb) [Staphylococcus caprae strain JMUB145]
ATGTTAAATAAAATAGTAATTGTTGGTAGGTTAACTAAAGATGCCCAAATATATGAAAAGGAGGATAGTAGAGTTGCAAC
GTTTTGTGTAGCAACAGAAAGAAATTACAAAGACGAAAATAATGAAGTTTCGAGCGACTATTTACTGTGTAAGGCATTTG
GTAAAACAGCTACGAATATTGAAAAATATACCAGTCAAGGTACTTTAGTAGGGATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGGCAAACACATTTTGTAACCGAACTATATGTAGAAACGATTAAATTCATGTCTCCCAAAACAAAAAG
TAACGAAATTATCTCTCAAAATCAATTTGACGAAGACACTTATCACTCAGACGAATTTGAAACTATCAATATATAA
ATGTTAAATAAAATAGTAATTGTTGGTAGGTTAACTAAAGATGCCCAAATATATGAAAAGGAGGATAGTAGAGTTGCAAC
GTTTTGTGTAGCAACAGAAAGAAATTACAAAGACGAAAATAATGAAGTTTCGAGCGACTATTTACTGTGTAAGGCATTTG
GTAAAACAGCTACGAATATTGAAAAATATACCAGTCAAGGTACTTTAGTAGGGATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGGCAAACACATTTTGTAACCGAACTATATGTAGAAACGATTAAATTCATGTCTCCCAAAACAAAAAG
TAACGAAATTATCTCTCAAAATCAATTTGACGAAGACACTTATCACTCAGACGAATTTGAAACTATCAATATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |