Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   NEE09_RS02155 Genome accession   NZ_CP099641
Coordinates   396430..397497 (+) Length   355 a.a.
NCBI ID   WP_000159554.1    Uniprot ID   A0A062WMA1
Organism   Streptococcus pneumoniae strain ATCC 700671     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 391430..402497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NEE09_RS02140 amiA3 391953..393932 (+) 1980 WP_000742236.1 peptide ABC transporter substrate-binding protein Regulator
  NEE09_RS02145 amiC 393999..395495 (+) 1497 WP_000759905.1 ABC transporter permease Regulator
  NEE09_RS02150 amiD 395495..396421 (+) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator
  NEE09_RS02155 amiE 396430..397497 (+) 1068 WP_000159554.1 ABC transporter ATP-binding protein Regulator
  NEE09_RS02160 amiF 397508..398434 (+) 927 WP_001291294.1 ATP-binding cassette domain-containing protein Regulator
  NEE09_RS02165 - 399053..399862 (+) 810 Protein_373 ABC transporter substrate-binding protein -
  NEE09_RS02170 - 399874..400751 (+) 878 Protein_374 ABC transporter permease -
  NEE09_RS02175 - 400764..401567 (+) 804 WP_000157672.1 ABC transporter ATP-binding protein -
  NEE09_RS02180 treR 401600..402310 (-) 711 WP_000760673.1 trehalose operon repressor Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39490.09 Da        Isoelectric Point: 4.8727

>NTDB_id=701191 NEE09_RS02155 WP_000159554.1 396430..397497(+) (amiE) [Streptococcus pneumoniae strain ATCC 700671]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=701191 NEE09_RS02155 WP_000159554.1 396430..397497(+) (amiE) [Streptococcus pneumoniae strain ATCC 700671]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTTGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGTAAATCTGTTT
TGACAAAGACCTTCACAGGTATGCTCGAAGAAAATGGTCGTATTGCCCAAGGTAGTATTGACTACCGTGGTCAGGACTTG
ACAGCTTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACTATCTTCCAGGACCCAATGACTAG
TTTGGACCCCATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGCATTCCAGACGCAGATAGACGTTTTAATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCGATTGCCCTTGCCTGCCGACCTGATGTCTTGATCTGTGATGAGCCAAC
AACTGCCTTGGATGTAACTATTCAAGCTCAGATTATTGATTTGCTAAAATCTTTACAAAACGAGTATCATTTCACAACAA
TCTTTATTACCCACGACCTTGGTGTGGTGGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAG
TATGGAACGGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCTTTTGCCT
TGCGTTCTGACTACGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTTCTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATCCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A062WMA1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

88.169

100

0.882

  amiE Streptococcus thermophilus LMG 18311

86.479

100

0.865

  amiE Streptococcus thermophilus LMD-9

86.479

100

0.865

  oppD Streptococcus mutans UA159

54.545

99.155

0.541