Detailed information NTG0701174

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP38_RS17270
• Genome accession: NZ_CP115275
• Coordinates: 3761723..3762748 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F014
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3756723..3767748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP38_RS17245 (PCP38_17240)	aroE	3756925..3757749 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP38_RS17250 (PCP38_17245)	hemF	3757807..3758724 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP38_RS17255 (PCP38_17250)	-	3758915..3759892 (+)	978	WP_021205368.1	NADPH:quinone reductase	-
PCP38_RS17260 (PCP38_17255)	-	3759902..3760459 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP38_RS17265 (PCP38_17260)	dprA	3760500..3761588 (-)	1089	WP_021205367.1	DNA-processing protein DprA	Machinery gene
PCP38_RS17270 (PCP38_17265)	tsaP	3761723..3762748 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP38_RS17275 (PCP38_17270)	def	3762887..3763393 (+)	507	WP_003107059.1	peptide deformylase	-
PCP38_RS17280 (PCP38_17275)	fmt	3763448..3764392 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
PCP38_RS17285 (PCP38_17280)	rsmB	3764389..3765693 (+)	1305	WP_003118477.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP38_RS17290 (PCP38_17285)	trkA	3765721..3767094 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP38_RS17295 (PCP38_17290)	-	3767243..3767560 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=701174 PCP38_RS17270 WP_003097294.1 3761723..3762748(-) (tsaP) [Pseudomonas aeruginosa strain F014]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=701174 PCP38_RS17270 WP_003097294.1 3761723..3762748(-) (tsaP) [Pseudomonas aeruginosa strain F014]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGGCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393