Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PCP38_RS15065 Genome accession   NZ_CP115275
Coordinates   3268356..3268763 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain F014     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3263356..3273763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PCP38_RS15045 (PCP38_15040) pilK 3264288..3265163 (-) 876 WP_004352088.1 type 4 fimbrial methyltransferase PilK -
  PCP38_RS15050 (PCP38_15045) pilJ 3265224..3267272 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  PCP38_RS15055 (PCP38_15050) - 3267357..3267893 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  PCP38_RS15060 (PCP38_15055) pilH 3267944..3268309 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PCP38_RS15065 (PCP38_15060) pilG 3268356..3268763 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PCP38_RS15070 (PCP38_15065) gshB 3269018..3269971 (+) 954 WP_003100943.1 glutathione synthase -
  PCP38_RS15075 (PCP38_15070) - 3270118..3271011 (+) 894 WP_003084580.1 TonB family protein -
  PCP38_RS15080 (PCP38_15075) - 3271060..3271629 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  PCP38_RS15085 (PCP38_15080) ruvX 3271629..3272063 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PCP38_RS15090 (PCP38_15085) pyrR 3272175..3272687 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PCP38_RS15095 (PCP38_15090) - 3272711..3273715 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=701168 PCP38_RS15065 WP_003084583.1 3268356..3268763(-) (pilG) [Pseudomonas aeruginosa strain F014]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=701168 PCP38_RS15065 WP_003084583.1 3268356..3268763(-) (pilG) [Pseudomonas aeruginosa strain F014]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385