Detailed information NTG0701048

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NF672_RS19120
• Genome accession: NZ_CP099608
• Coordinates: 4326035..4328269 (-)
• Length: 744 a.a.
• NCBI ID: WP_252873199.1
• Uniprot ID: -
• Organism: Pseudomonas moraviensis strain OTU5BARRA1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4321035..4333269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NF672_RS19085 (NF672_19085)	murB	4321412..4322431 (-)	1020	WP_252873197.1	UDP-N-acetylmuramate dehydrogenase	-
NF672_RS19090 (NF672_19090)	-	4322428..4322892 (-)	465	WP_064361450.1	low molecular weight protein-tyrosine-phosphatase	-
NF672_RS19095 (NF672_19095)	kdsB	4322892..4323656 (-)	765	WP_042610690.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NF672_RS19100 (NF672_19100)	-	4323653..4323838 (-)	186	WP_003179363.1	Trm112 family protein	-
NF672_RS19105 (NF672_19105)	lpxK	4323863..4324873 (-)	1011	WP_252873198.1	tetraacyldisaccharide 4'-kinase	-
NF672_RS19110 (NF672_19110)	-	4324873..4325301 (-)	429	WP_042610688.1	biopolymer transporter ExbD	-
NF672_RS19115 (NF672_19115)	exbB	4325298..4325933 (-)	636	WP_007908216.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
NF672_RS19120 (NF672_19120)	comA	4326035..4328269 (-)	2235	WP_252873199.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NF672_RS19125 (NF672_19125)	-	4328406..4328924 (+)	519	WP_042610686.1	DUF2062 domain-containing protein	-
NF672_RS19130 (NF672_19130)	-	4329065..4329844 (-)	780	WP_039760202.1	ABC transporter permease	-
NF672_RS19135 (NF672_19135)	-	4329841..4330773 (-)	933	WP_042610685.1	ABC transporter ATP-binding protein	-
NF672_RS19140 (NF672_19140)	-	4330907..4331530 (-)	624	WP_042610684.1	glutathione S-transferase	-
NF672_RS19145 (NF672_19145)	-	4331574..4332233 (-)	660	WP_252873200.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81878.97 Da
• Isoelectric Point: 9.3148

>NTDB_id=701048 NF672_RS19120 WP_252873199.1 4326035..4328269(-) (comA) [Pseudomonas moraviensis strain OTU5BARRA1]
MRTGMMALAVGLLAPVFLPALPPVGWWVVLPVVALMLLTFRSYPLAFLLFGFTWACVGAQMALNDRLPPPLDGETRWLEG
RVVGLPQHGDGVVRFELADARSRHEKLPSLMRLAWYAGPPVNSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATG
TIKDGQRLAEARYAWRDSVRQRLLAVDAQGREGALAALVLGDGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARYGLWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVALVLLWRLRFRHLGAWRPLLLAFNGVLLFDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALSLPISVSGPVANLLAVPWVSLVVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIDWLFIGLALIAGQWPAWIPAAIPLWALVLGSLGALLLLLPRGVPLRPLGWPLMLLLI
LPPRERIEEGRADVWQLDVGQGLAILVRTRHHALLYDAGPRFGEFDLGERVVLPALRKLNVQTLDLMLLSHADADHAGGA
GAVMRGLDVHRIVSGDPPNLPPELSAEACASGEQWQWDGVQFQLWQWSAADDSNQRSCVLQIEANGERLLLTGDIDIHAE
RDLLDSQLAVPTQWLQSPHHGSRSSSSMALLKALQPEAVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEQGAIHLQL
GSFKPPWTMRHQRRFWREPPALGR

Nucleotide

• Length: 2235 bp

>NTDB_id=701048 NF672_RS19120 WP_252873199.1 4326035..4328269(-) (comA) [Pseudomonas moraviensis strain OTU5BARRA1]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGCCCCGGTTTTTTTGCCGGCCTTGCCGCCGGTCGGTTGGTG
GGTGGTACTGCCGGTGGTGGCGCTGATGCTCCTAACGTTTCGCAGCTATCCACTGGCATTTTTGTTGTTTGGCTTCACAT
GGGCCTGCGTCGGCGCGCAGATGGCTCTGAATGACCGCTTGCCGCCGCCACTGGACGGCGAAACCCGTTGGCTCGAAGGG
CGCGTGGTCGGCTTGCCGCAGCACGGCGACGGTGTGGTGCGTTTCGAACTGGCTGACGCCCGCTCGCGCCACGAAAAGCT
GCCATCGCTGATGCGCCTGGCCTGGTACGCCGGGCCGCCGGTCAACAGCGGCGAACGCTGGCGTCTGGCGGTGAAGTTGA
AGCGCCCGGGTGGCTTGCTCAATCCCGACGCCTTCGATTACGAGGCCTGGCTGCTCGCCCAGCGCATCGGTGCGACCGGT
ACGATCAAGGATGGCCAGCGTCTGGCTGAGGCCCGGTACGCCTGGCGCGACAGCGTTCGTCAGCGCCTGCTGGCGGTCGA
TGCGCAGGGGCGAGAGGGCGCGTTGGCGGCGCTGGTGCTCGGCGACGGTTCGGGTCTGAGTCGCGAGGACTGGCAGGTAC
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATTTCCGGCCAGCACATCGGTTTGCTCGCCGCGGTGATGTATCTGCTG
GTCGCCGGGCTTGCGCGATACGGTTTATGGCCGTTGCGCTGGCCATGGCTGCCCTGGGCATGCGGCCTGGCCTTCGCGGC
GGCGCTGGGTTATGGCTTGCTCGCCGGTTTCGATGTGCCGGTGCAGCGCGCCTGCGTGATGGTGGCGCTGGTGCTGTTGT
GGCGCCTGCGTTTTCGCCATCTCGGTGCGTGGAGGCCGTTGTTGCTGGCGTTCAACGGCGTGCTGCTGTTTGATCCGCTG
GCCAGTTTGCGTCCCGGGTTCTGGCTGTCTTTCGCCGCGGTGGCGGTACTGATTTTCACCTTCGGCGGGCGGCTGGGCGC
TTGGCGCTGGTGGCAGACCTGGACCCGCGCGCAGTGGCTGATCGCGATTGGTTTGTGTCCGGTGTTGCTGGCGCTCAGCC
TGCCGATCAGCGTCAGTGGCCCCGTGGCGAATCTGTTGGCGGTGCCGTGGGTCAGTCTTGTGGTATTGCCACCGGCGTTG
CTCGGCACGCTATTGCTGCCCGTGCCTTATGTTGGCGAAGGGTTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TATCGGACTGGCGCTGATTGCCGGGCAATGGCCGGCGTGGATACCTGCCGCCATCCCCTTGTGGGCGCTGGTCTTGGGCA
GCCTCGGCGCCTTGTTATTGCTGTTGCCCCGTGGTGTGCCGCTGCGTCCATTGGGCTGGCCGTTGATGTTGCTGCTGATA
TTGCCGCCGCGAGAGCGAATAGAAGAGGGGCGGGCCGATGTCTGGCAACTCGACGTCGGCCAAGGCCTGGCCATCCTCGT
GCGCACCCGCCATCACGCGTTGCTCTATGACGCCGGGCCGCGTTTCGGCGAGTTCGATCTCGGCGAGCGGGTGGTGCTGC
CAGCGCTGCGCAAACTCAATGTGCAAACGCTCGACCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGCGCC
GGGGCGGTGATGCGTGGATTGGACGTGCACCGCATCGTCAGTGGCGACCCGCCAAACCTGCCGCCGGAGTTGAGCGCCGA
AGCCTGCGCAAGTGGCGAACAGTGGCAATGGGATGGCGTGCAGTTCCAGCTCTGGCAATGGTCGGCGGCCGATGACAGCA
ACCAGCGCTCCTGTGTCTTGCAGATCGAAGCCAACGGCGAGCGCCTGCTGCTCACCGGCGACATCGACATTCACGCCGAG
CGCGATCTGCTCGACAGTCAACTGGCGGTGCCGACGCAGTGGCTGCAATCGCCGCATCATGGCAGTCGCAGCTCATCGTC
GATGGCCCTGCTCAAAGCCTTGCAGCCGGAAGCGGTGCTGATCTCCCGTGGCCACGGCAACTCCTTCGGTCACCCGCATC
CGACCGTGCTTGCGCGCTACCGCAAGCAAGGCCTGCGCATCTATGACAGCGCCGAGCAGGGCGCCATCCATCTGCAACTG
GGCAGCTTCAAACCGCCGTGGACGATGCGTCACCAGCGGCGTTTCTGGCGCGAGCCGCCGGCGCTTGGCCGTTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.865	96.64	0.608
comA	Ralstonia pseudosolanacearum GMI1000	35.128	100	0.368