Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   NGP02_RS03225 Genome accession   NZ_CP099551
Coordinates   754601..755878 (-) Length   425 a.a.
NCBI ID   WP_050338487.1    Uniprot ID   F6IRD4
Organism   Lactiplantibacillus pentosus strain KW1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 749601..760878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NGP02_RS03220 (NGP02_03235) - 752853..754562 (-) 1710 WP_003638962.1 proline--tRNA ligase -
  NGP02_RS03225 (NGP02_03240) eeP 754601..755878 (-) 1278 WP_050338487.1 RIP metalloprotease RseP Regulator
  NGP02_RS03230 (NGP02_03245) - 755915..756700 (-) 786 WP_050338486.1 phosphatidate cytidylyltransferase -
  NGP02_RS03235 (NGP02_03250) - 756716..757495 (-) 780 WP_050338485.1 isoprenyl transferase -
  NGP02_RS03240 (NGP02_03255) frr 757615..758178 (-) 564 WP_003638966.1 ribosome recycling factor -
  NGP02_RS03245 (NGP02_03260) pyrH 758180..758902 (-) 723 WP_003638967.1 UMP kinase -
  NGP02_RS03250 (NGP02_03265) tsf 759103..759981 (-) 879 WP_003638968.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46246.85 Da        Isoelectric Point: 10.0234

>NTDB_id=700659 NGP02_RS03225 WP_050338487.1 754601..755878(-) (eeP) [Lactiplantibacillus pentosus strain KW1]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGQDGIVHSINASKKTTLFNGIPLSVTATDLERELWIEGYENGDESEVKRYSVDHDATIIESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTNVSATTANSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLRLTIKRDGQTKKITVTPAAKTVSGNRIGQIGVMWATKTDKSFGAKLAYGFTGSWNITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGLRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=700659 NGP02_RS03225 WP_050338487.1 754601..755878(-) (eeP) [Lactiplantibacillus pentosus strain KW1]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTTATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATTTTGGTGCGTGAATTTTCTGTTGGGATGGGACCCAAGGCAGTTGCGTTTCGGCGGAATGCGACGA
CTTATACGTTACGTTTCTTGCCAATTGGTGGGTACGTGCGGATGGCCGGAGTCGCTGACGATGAAGATGAGGAACTGAAA
CCCGGAACGCCAGTCAGCTTACAGATCGGTCAGGATGGCATCGTCCATTCAATCAATGCTAGTAAGAAGACGACGTTGTT
CAACGGGATTCCGCTATCTGTCACGGCGACCGACTTAGAGCGCGAGCTATGGATCGAAGGCTATGAGAATGGCGACGAGA
GCGAAGTTAAACGTTATTCAGTCGACCACGATGCGACCATTATCGAAAGTGATGGGACTGAGGTGCAGATTGCCCCAGTA
GATGTTCAATTTCAGTCAGCCAAGCTTTGGCAGCGGATGCTGACCAATTTTGCTGGTCCCATGAATAACTTCATCTTAGC
CATCATCACGTTTGCAATCCTGGCGTTCATGCAGGGTGGCGTGACGAGTACGACGACTAATGTTTCGGCGACGACGGCCA
ATTCGGTTGCACGCCAAGCTGGGATTCAAAAAGGTGATCAAATTGTCGCTGTCAATGGTAAAAAGATGACCAGTGCGCAG
TCGATTTCGCTCCTGATTCAAGACAGTCCCAAGCAACGGTTGCGTTTGACGATCAAACGTGATGGTCAAACCAAAAAAAT
TACGGTAACACCAGCTGCTAAGACGGTCTCTGGTAATCGTATCGGCCAAATCGGCGTGATGTGGGCGACGAAGACTGACA
AGAGTTTTGGTGCCAAATTGGCCTATGGGTTTACGGGCTCGTGGAATATCACCAAACAGATTTTTCAGGTCCTCGGCCGG
ATGGTCACGCATGGCTTCAGTTTGAACGATTTAGGTGGCCCGGTCGCTATCTTTGCCACGACCTCGCAAGCGGCTAAATC
AGGTCTGCGAACGGTGATTTATTTGCTGGCAGTCTTGTCGATCAACCTGGGAATTGTCAATTTATTACCAATTCCAGCCC
TCGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGAGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCTTGATGTTATTAATGATTTTAGTCACTTGGAATGATATCCAACGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F6IRD4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.299

100

0.496
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494