Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ALSL_RS07185 Genome accession   NZ_AP018560
Coordinates   1527687..1528091 (-) Length   134 a.a.
NCBI ID   WP_269433057.1    Uniprot ID   A0A2Z6E4Z2
Organism   Aerosticca soli strain Dysh456     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1522687..1533091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ALSL_RS07170 (ALSL_1443) - 1524622..1526652 (-) 2031 WP_126537816.1 methyl-accepting chemotaxis protein -
  ALSL_RS07175 (ALSL_1444) - 1526759..1527301 (-) 543 WP_126537818.1 chemotaxis protein CheW -
  ALSL_RS07180 (ALSL_1445) - 1527298..1527669 (-) 372 WP_126537820.1 response regulator -
  ALSL_RS07185 (ALSL_1446) pilG 1527687..1528091 (-) 405 WP_269433057.1 response regulator Regulator
  ALSL_RS07190 (ALSL_1447) gshB 1528389..1529351 (+) 963 WP_126537822.1 glutathione synthase -
  ALSL_RS07195 (ALSL_1448) - 1529348..1530208 (+) 861 WP_231700186.1 energy transducer TonB -
  ALSL_RS07200 (ALSL_1449) - 1530272..1530868 (-) 597 WP_126537824.1 YSC84-related protein -
  ALSL_RS07205 (ALSL_1450) - 1531094..1531663 (+) 570 WP_126537826.1 YqgE/AlgH family protein -
  ALSL_RS07210 (ALSL_1451) ruvX 1531660..1532118 (+) 459 WP_126537828.1 Holliday junction resolvase RuvX -
  ALSL_RS07215 (ALSL_1452) - 1532115..1533041 (+) 927 WP_126537830.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14726.16 Da        Isoelectric Point: 9.1434

>NTDB_id=70056 ALSL_RS07185 WP_269433057.1 1527687..1528091(-) (pilG) [Aerosticca soli strain Dysh456]
MNLNSNANGLAGLKVMVIDDSKTIRRTAETLLRKEGCEVLTAVDGFEALAKIAEHKPAIIFVDIMMPRLDGYQTCALIKN
NPQFRGTPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIQRHVGQPA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=70056 ALSL_RS07185 WP_269433057.1 1527687..1528091(-) (pilG) [Aerosticca soli strain Dysh456]
GTGAACCTGAACTCGAACGCTAACGGTCTGGCCGGTCTCAAGGTCATGGTGATCGACGACTCCAAGACCATCCGGCGCAC
CGCGGAGACGTTGCTCAGGAAGGAAGGCTGCGAGGTGCTGACCGCCGTCGATGGCTTCGAGGCGCTAGCCAAGATCGCCG
AGCACAAGCCCGCGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAGAAC
AATCCGCAGTTCCGCGGCACGCCGGTCATCATGCTGAGTTCCAAGGACGGCCTGTTCGACAAGGCCCGGGGGCGCATCGT
CGGCGCCGAGCAATACCTCACCAAGCCCTTCACCCGCGACGAACTCTTGGGCGCCATCCAGCGCCACGTCGGTCAGCCGG
CCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z6E4Z2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

92.537

0.687
  vicR Streptococcus mutans UA159

41.88

87.313

0.366

Multiple sequence alignment