Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   PCP74_RS03170 Genome accession   NZ_CP115263
Coordinates   669270..669893 (+) Length   207 a.a.
NCBI ID   WP_003111192.1    Uniprot ID   A0A0H2ZJZ4
Organism   Pseudomonas aeruginosa strain F023     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 664270..674893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PCP74_RS03145 (PCP74_03145) - 665355..665582 (-) 228 WP_003097347.1 DUF1161 domain-containing protein -
  PCP74_RS03150 (PCP74_03150) - 665766..665981 (-) 216 WP_003097345.1 dodecin -
  PCP74_RS03155 (PCP74_03155) trpI 666082..666969 (-) 888 WP_003114633.1 trpBA operon transcriptional activator TrpI -
  PCP74_RS03160 (PCP74_03160) trpB 667073..668281 (+) 1209 WP_003097340.1 tryptophan synthase subunit beta -
  PCP74_RS03165 (PCP74_03165) trpA 668278..669084 (+) 807 WP_023085753.1 tryptophan synthase subunit alpha -
  PCP74_RS03170 (PCP74_03170) letA 669270..669893 (+) 624 WP_003111192.1 response regulator transcription factor Regulator
  PCP74_RS03175 (PCP74_03175) - 669901..670266 (+) 366 WP_003097330.1 Hpt domain-containing protein -
  PCP74_RS03180 (PCP74_03180) - 670245..670622 (-) 378 WP_003114635.1 DOPA 4,5-dioxygenase family protein -
  PCP74_RS03185 (PCP74_03185) - 670633..671547 (-) 915 WP_004351933.1 choline sulfate utilization transcriptional regulator -
  PCP74_RS03190 (PCP74_03190) betC 671660..673171 (+) 1512 WP_003161593.1 choline-sulfatase -
  PCP74_RS03195 (PCP74_03195) - 673188..674111 (+) 924 WP_003118485.1 choline ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 22859.66 Da        Isoelectric Point: 10.1491

>NTDB_id=700211 PCP74_RS03170 WP_003111192.1 669270..669893(+) (letA) [Pseudomonas aeruginosa strain F023]
MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVL
TRQNPAQFAPRCLQAGAMGFVSKRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLAN
GNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI

Nucleotide


Download         Length: 624 bp        

>NTDB_id=700211 PCP74_RS03170 WP_003111192.1 669270..669893(+) (letA) [Pseudomonas aeruginosa strain F023]
ATGAGTAAGGTGCTGATCGTCGATGATCATCCCGCTATCCGCCTGGCCGTGCGCTTGCTGTTCGAGCGCGACGGTTTCAC
CATCGTCGGCGAGGCCGACAACGGTGCCGAAGCCCTGCAGGTAGCCCGCAAGAAGTCTCCCGACCTGGCCATCCTGGACA
TCGGCATCCCCAAGATCGACGGTCTCGAAGTGATAGCCCGCCTGAAGTCCCTGAAGCTGGACACCAAGGTCCTGGTCCTG
ACCCGGCAGAATCCGGCGCAGTTCGCCCCGCGCTGCCTGCAGGCCGGCGCCATGGGCTTCGTCAGCAAAAGGGAAAACCT
CTCCGAGCTGCTGCTCGCCGCCAAGGCCGTGCTGGCCGGCTACATCCACTTCCCCACCGGGGCGTTGCGCAGCATCAACC
AGCAGAGCCGCGACAACGAGGCCCGCATGCTGGAAAGCCTTTCCGACCGCGAGATGACCGTGCTGCAGTACCTGGCCAAC
GGCAATACCAACAAGGCCATCGCCCAGCAGCTGTTCCTCAGCGAGAAAACCGTGAGCACCTACAAGTCACGCATCATGCT
GAAACTCAACGCCCATTCCCTGGCCGGCCTGATCGATTTCGCCCGCCGCCACGAGCTGATCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Bacterial regulatory proteins, luxR family (GerE)

(145-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZJZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

35.377

100

0.362
  letA Legionella pneumophila strain ERS1305867

35.377

100

0.362