Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   NC516_RS06740 Genome accession   NZ_CP099485
Coordinates   1340615..1341892 (-) Length   425 a.a.
NCBI ID   WP_105300050.1    Uniprot ID   -
Organism   Latilactobacillus sakei strain WiKim0095     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1335615..1346892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NC516_RS06735 (NC516_06735) - 1338880..1340589 (-) 1710 WP_105300051.1 proline--tRNA ligase -
  NC516_RS06740 (NC516_06740) eeP 1340615..1341892 (-) 1278 WP_105300050.1 RIP metalloprotease RseP Regulator
  NC516_RS06745 (NC516_06745) - 1342098..1342886 (-) 789 WP_016265347.1 phosphatidate cytidylyltransferase -
  NC516_RS06750 (NC516_06750) - 1342917..1343672 (-) 756 WP_016265348.1 isoprenyl transferase -
  NC516_RS06755 (NC516_06755) - 1343840..1346587 (+) 2748 WP_011374958.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46670.31 Da        Isoelectric Point: 9.5179

>NTDB_id=699973 NC516_RS06740 WP_105300050.1 1340615..1341892(-) (eeP) [Latilactobacillus sakei strain WiKim0095]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEADGTEVQIAPVDF
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQENSAAQKAGLKANDRLLKVDNKKVASFTDF
SAIISEHPNETVAVRVQRGATEKTIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKVSYGFTQAWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=699973 NC516_RS06740 WP_105300050.1 1340615..1341892(-) (eeP) [Latilactobacillus sakei strain WiKim0095]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTTTACATGGCTAA
GCGCTCAGGCATTTTGGTGCGTGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCAACTCGCAAAAACGGCACAACTT
ACACCATCCGGTGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTGGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTGCCTTTCCAAATTGCTAAAACAGATTTACAAAAAGAATTGTGGGTCGAAGGTTACGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATTTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
GGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGCGTGCCACAGCAATCCAATCAAATTGGCACGGTACAAGAGAATTCTG
CTGCTCAAAAGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAAGTTGATAACAAAAAAGTAGCGAGCTTCACTGACTTT
AGTGCGATTATTTCAGAACACCCTAACGAAACTGTTGCGGTGCGCGTTCAACGGGGCGCAACTGAAAAGACAATCAAGGT
GACTCCCAAGGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTAGGGGTCACACAAAAAGTCAAAATGGATC
ATAGCCTAAAGGCCAAGGTTTCTTACGGCTTTACACAAGCTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGCATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTAGCATTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCAATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAATGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-258)

Peptidase family M50 (Peptidase_M50)

(6-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.926

100

0.489
  eeP Streptococcus thermophilus LMG 18311

47.685

100

0.485