Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   M5C72_RS05810 Genome accession   NZ_CP099481
Coordinates   1163082..1164350 (+) Length   422 a.a.
NCBI ID   WP_076616230.1    Uniprot ID   A0A1P8Q4C1
Organism   Companilactobacillus allii strain WiKim39     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1158082..1169350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5C72_RS05780 (M5C72_05780) rpsB 1158317..1159102 (+) 786 WP_076616214.1 30S ribosomal protein S2 -
  M5C72_RS05785 (M5C72_05785) tsf 1159171..1160046 (+) 876 WP_076616216.1 translation elongation factor Ts -
  M5C72_RS05790 (M5C72_05790) pyrH 1160211..1160942 (+) 732 WP_076616219.1 UMP kinase -
  M5C72_RS05795 (M5C72_05795) frr 1160935..1161492 (+) 558 WP_076616222.1 ribosome recycling factor -
  M5C72_RS05800 (M5C72_05800) - 1161511..1162254 (+) 744 WP_076616224.1 isoprenyl transferase -
  M5C72_RS05805 (M5C72_05805) - 1162269..1163063 (+) 795 WP_076616227.1 phosphatidate cytidylyltransferase -
  M5C72_RS05810 (M5C72_05810) eeP 1163082..1164350 (+) 1269 WP_076616230.1 RIP metalloprotease RseP Regulator
  M5C72_RS05815 (M5C72_05815) - 1164363..1166069 (+) 1707 WP_076616232.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46271.92 Da        Isoelectric Point: 9.4827

>NTDB_id=699939 M5C72_RS05810 WP_076616230.1 1163082..1164350(+) (eeP) [Companilactobacillus allii strain WiKim39]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIFAYRKNSTTYTLRLLPLGGYVRMAGAQEDDSEIKPG
TMASLVLDDSNNVIKIITSSKVYDENGVPVQISKADLVDSLIIEGYENGDESEIKSYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFILAIVCAIIAAFMMNGVVQNTNQLGQIQSGSVAAKAGLKANDKILMVNNHKTDSWTTL
SENIQKYPGKKTTFKVKSGNKVSTITLTPKTVKSSGQKYGQIGIMPKRDHSFVAKIKYGFTYSWQTTVQILHVLGKMVTG
GFSINQLSGPVGIYSMTSQVSSQGLLSIILFMSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPLPEEYENVITLIG
VGILVLLMVAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=699939 M5C72_RS05810 WP_076616230.1 1163082..1164350(+) (eeP) [Companilactobacillus allii strain WiKim39]
ATGACCGCGATAATAACGTTTATTATTGTTTTTGGAATATTGGTAATTGTTCATGAATTTGGACATTATTATGCAGCAAA
AAAATCTGGGATTCTGGTTCGTGAGTTTTCCGTCGGAATGGGTCCTAAGATTTTTGCTTATCGTAAAAATAGTACAACTT
ATACACTGAGGCTATTGCCACTAGGTGGATATGTCAGAATGGCTGGTGCTCAAGAAGACGATTCTGAAATAAAACCTGGT
ACTATGGCTTCTTTAGTTTTGGATGATTCAAATAATGTTATTAAGATTATTACATCTAGTAAGGTATATGACGAAAATGG
TGTTCCAGTTCAGATATCTAAAGCTGATTTGGTAGATTCATTAATCATTGAAGGTTATGAAAATGGTGATGAATCAGAAA
TTAAGTCATATTCTGTAGATCATGATGCGACAATTGTAGAAGAGGATGGCACCGAGGTACAAATCGCACCTCGTGATGTT
CAATTGCAATCGGTTTCTGTATGGAAACGTATGATAACTAATTTTGCTGGTCCGTTTAACAATTTCATTTTGGCTATTGT
TTGTGCTATTATAGCCGCATTTATGATGAATGGTGTTGTACAAAATACGAATCAGCTTGGACAAATCCAAAGTGGTAGTG
TTGCTGCTAAAGCGGGTTTAAAGGCAAACGATAAGATCTTAATGGTTAATAATCATAAGACAGATTCTTGGACAACATTA
TCTGAGAATATTCAAAAGTATCCAGGTAAAAAAACAACCTTTAAAGTGAAATCTGGAAATAAAGTTTCAACTATTACATT
AACTCCAAAGACTGTTAAATCATCCGGTCAAAAGTATGGTCAAATTGGTATTATGCCAAAAAGAGATCATAGTTTTGTCG
CTAAGATTAAATATGGTTTTACGTATAGTTGGCAAACAACCGTACAGATTCTTCATGTATTAGGTAAAATGGTAACTGGC
GGATTTAGTATTAATCAACTATCCGGACCAGTTGGTATTTATTCAATGACATCTCAAGTATCCTCACAAGGATTACTAAG
TATCATCTTATTTATGTCAATGCTGTCGATGAATCTAGGAATTGTTAACTTGATTCCTATTCCAGCACTTGATGGTGGTA
AGATTTTGTTGAATATCGTTGAAGCAATAAGAAGAAAGCCACTTCCAGAAGAATATGAAAATGTCATAACGTTAATCGGG
GTCGGCATTTTGGTTCTTTTGATGGTAGCTGTTACGTGGAATGATATTCAACGTTTCTTCATAAAATAG

Domains


Predicted by InterproScan.

(209-257)

(6-407)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1P8Q4C1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

50.585

100

0.512

  eeP Streptococcus thermophilus LMD-9

50.351

100

0.509