Detailed information NTG0699843

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NG745_RS01990
• Genome accession: NZ_CP099465
• Coordinates: 396586..397734 (+)
• Length: 382 a.a.
• NCBI ID: WP_098080978.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Ag75
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391586..402734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NG745_RS01970 (NG745_01970)	-	391983..392666 (-)	684	WP_098080976.1	ABC transporter ATP-binding protein	-
NG745_RS01975 (NG745_01975)	-	392681..394117 (-)	1437	WP_098080977.1	ABC transporter permease	-
NG745_RS01980 (NG745_01980)	-	394330..395013 (+)	684	WP_063096183.1	response regulator transcription factor	-
NG745_RS01985 (NG745_01985)	-	395000..396433 (+)	1434	WP_162992601.1	HAMP domain-containing sensor histidine kinase	-
NG745_RS01990 (NG745_01990)	rapC	396586..397734 (+)	1149	WP_098080978.1	Rap family tetratricopeptide repeat protein	Regulator
NG745_RS01995 (NG745_01995)	phrC	397718..397837 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NG745_RS02000 (NG745_02000)	-	397986..398081 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
NG745_RS02005 (NG745_02005)	-	398176..399540 (-)	1365	WP_080130839.1	aspartate kinase	-
NG745_RS02010 (NG745_02010)	ceuB	399954..400907 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
NG745_RS02015 (NG745_02015)	-	400897..401844 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
NG745_RS02020 (NG745_02020)	-	401838..402596 (+)	759	WP_063096189.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45535.74 Da
• Isoelectric Point: 4.9916

>NTDB_id=699843 NG745_RS01990 WP_098080978.1 396586..397734(+) (rapC) [Bacillus velezensis strain Ag75]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNYFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=699843 NG745_RS01990 WP_098080978.1 396586..397734(+) (rapC) [Bacillus velezensis strain Ag75]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTATTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTACTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568