Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NG745_RS01790 Genome accession   NZ_CP099465
Coordinates   338308..338706 (-) Length   132 a.a.
NCBI ID   WP_020955304.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ag75     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 333308..343706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NG745_RS01765 (NG745_01765) - 333480..334682 (+) 1203 WP_098080959.1 GTP-binding protein -
  NG745_RS01770 (NG745_01770) - 334747..335883 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  NG745_RS01775 (NG745_01775) - 335898..336332 (+) 435 WP_063096155.1 RDD family protein -
  NG745_RS01780 (NG745_01780) - 336404..336727 (+) 324 WP_052827031.1 YckD family protein -
  NG745_RS01785 (NG745_01785) - 336831..338267 (+) 1437 WP_098080961.1 family 1 glycosylhydrolase -
  NG745_RS01790 (NG745_01790) nin/comJ 338308..338706 (-) 399 WP_020955304.1 competence protein ComJ Regulator
  NG745_RS01795 (NG745_01795) nucA/comI 338727..339164 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NG745_RS01800 (NG745_01800) hxlB 339524..340081 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  NG745_RS01805 (NG745_01805) hxlA 340078..340713 (-) 636 WP_025284209.1 3-hexulose-6-phosphate synthase -
  NG745_RS01810 (NG745_01810) - 340945..341307 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.97 Da        Isoelectric Point: 4.9712

>NTDB_id=699840 NG745_RS01790 WP_020955304.1 338308..338706(-) (nin/comJ) [Bacillus velezensis strain Ag75]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=699840 NG745_RS01790 WP_020955304.1 338308..338706(-) (nin/comJ) [Bacillus velezensis strain Ag75]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75