Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SA27298_RS03220 Genome accession   NZ_AP018548
Coordinates   660057..660860 (+) Length   267 a.a.
NCBI ID   WP_003032665.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CCUG 27928     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 655057..665860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS03200 (SA27298_0656) - 656034..657347 (+) 1314 WP_003032712.1 glycosyltransferase family 4 protein -
  SA27298_RS03205 - 657374..657715 (+) 342 WP_003032667.1 hypothetical protein -
  SA27298_RS03210 (SA27298_0658) micA 658009..658710 (+) 702 WP_003025150.1 response regulator YycF Regulator
  SA27298_RS03215 (SA27298_0659) micB 658703..660055 (+) 1353 WP_003032751.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SA27298_RS03220 (SA27298_0660) vicX 660057..660860 (+) 804 WP_003032665.1 MBL fold metallo-hydrolase Regulator
  SA27298_RS03225 - 660869..661226 (+) 358 Protein_599 DUF454 family protein -
  SA27298_RS03230 (SA27298_0664) rnc 661619..662317 (+) 699 WP_003032757.1 ribonuclease III -
  SA27298_RS03235 (SA27298_0665) smc 662308..665841 (+) 3534 WP_003032703.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29896.86 Da        Isoelectric Point: 6.0342

>NTDB_id=69976 SA27298_RS03220 WP_003032665.1 660057..660860(+) (vicX) [Streptococcus anginosus strain CCUG 27928]
MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMINQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=69976 SA27298_RS03220 WP_003032665.1 660057..660860(+) (vicX) [Streptococcus anginosus strain CCUG 27928]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTGGCATCGGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAGGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAGATTGACCGCAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCACGAGCATAAGGATCATATCCACGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATCTATGCGAACCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGATTGATGAAGGATGATAAGAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCAGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCTAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGTCTGAA
GCAACGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGATCAATCAATTA
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCGGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

82.022

100

0.82

Multiple sequence alignment