Detailed information NTG0699743

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP63_RS19595
• Genome accession: NZ_CP115258
• Coordinates: 4257621..4258646 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F028
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4252621..4263646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP63_RS19570 (PCP63_19560)	aroE	4252823..4253647 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP63_RS19575 (PCP63_19565)	hemF	4253705..4254622 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP63_RS19580 (PCP63_19570)	-	4254813..4255790 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
PCP63_RS19585 (PCP63_19575)	-	4255800..4256357 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP63_RS19590 (PCP63_19580)	dprA	4256398..4257486 (-)	1089	WP_329033841.1	DNA-processing protein DprA	Machinery gene
PCP63_RS19595 (PCP63_19585)	tsaP	4257621..4258646 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP63_RS19600 (PCP63_19590)	def	4258785..4259291 (+)	507	WP_003107059.1	peptide deformylase	-
PCP63_RS19605 (PCP63_19595)	fmt	4259346..4260290 (+)	945	WP_096252951.1	methionyl-tRNA formyltransferase	-
PCP63_RS19610 (PCP63_19600)	rsmB	4260287..4261591 (+)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP63_RS19615 (PCP63_19605)	trkA	4261618..4262991 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP63_RS19620 (PCP63_19610)	-	4263140..4263457 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=699743 PCP63_RS19595 WP_003097294.1 4257621..4258646(-) (tsaP) [Pseudomonas aeruginosa strain F028]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=699743 PCP63_RS19595 WP_003097294.1 4257621..4258646(-) (tsaP) [Pseudomonas aeruginosa strain F028]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTTAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAACTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393