Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   EL279_RS10285 Genome accession   NZ_AP018543
Coordinates   2022613..2023881 (-) Length   422 a.a.
NCBI ID   WP_002362168.1    Uniprot ID   -
Organism   Enterococcus faecalis strain KUB3007     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2017613..2028881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL279_RS10280 (KUB3007_C19430) - 2020823..2022541 (-) 1719 WP_033786419.1 proline--tRNA ligase -
  EL279_RS10285 (KUB3007_C19440) eeP 2022613..2023881 (-) 1269 WP_002362168.1 RIP metalloprotease RseP Regulator
  EL279_RS10290 (KUB3007_C19450) - 2024297..2025076 (+) 780 WP_002359767.1 SDR family oxidoreductase -
  EL279_RS10295 (KUB3007_C19460) - 2025161..2025763 (+) 603 WP_002389010.1 YczE/YyaS/YitT family protein -
  EL279_RS10305 (KUB3007_C19470) sufB 2025926..2027320 (-) 1395 WP_002356769.1 Fe-S cluster assembly protein SufB -
  EL279_RS10310 (KUB3007_C19480) sufU 2027339..2027806 (-) 468 WP_010819535.1 Fe-S cluster assembly sulfur transfer protein SufU -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46486.46 Da        Isoelectric Point: 6.6651

>NTDB_id=69937 EL279_RS10285 WP_002362168.1 2022613..2023881(-) (eeP) [Enterococcus faecalis strain KUB3007]
MKTIITFIIVFGILVLVHEFGHFYFAKRAGILVREFAIGMGPKIFAHRGKDGTTYTIRLLPIGGYVRMAGMGEDMTEITP
GMPLSVELNAVGNVVKINTSKKVQLPHSIPMEVVDFDLEKELFIKGYVNGNEEEETVYKVDHDATIIESDGTEVRIAPLD
VQFQSAKLSQRILTNFAGPMNNFILGFILFTLAVFLQGGVTDLNTNQIGQVIPNGPAAEAGLKENDKVLSINNQKIKKYE
DFTTIVQKNPEKPLTFVVERNGKEEQLTVTPEKQKVEKQTIGKVGVYPYMKTDLPSKLMGGIQDTLNSTTQIFKALGSLF
TGFSLNKLGGPVMMFKLSEEASNAGVSTVVFLMAMLSMNLGIINLLPIPALDGGKIVLNIIEGVRGKPISPEKEGIITLI
GFGFVMVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=69937 EL279_RS10285 WP_002362168.1 2022613..2023881(-) (eeP) [Enterococcus faecalis strain KUB3007]
ATGAAAACAATTATCACATTCATTATTGTCTTCGGTATTCTTGTCCTCGTACATGAATTTGGCCACTTTTATTTTGCAAA
ACGAGCGGGTATTTTAGTTCGTGAGTTTGCAATCGGAATGGGACCAAAGATTTTTGCGCATCGTGGAAAAGATGGCACCA
CTTATACGATTCGCTTATTGCCAATTGGTGGCTATGTGCGAATGGCTGGGATGGGCGAAGACATGACAGAAATCACACCA
GGTATGCCTCTATCTGTTGAGTTAAATGCCGTGGGTAATGTGGTTAAAATTAATACAAGTAAAAAAGTACAATTACCTCA
TAGTATTCCGATGGAAGTCGTTGATTTTGATCTTGAAAAAGAATTATTCATCAAGGGCTATGTCAATGGAAACGAGGAAG
AAGAAACTGTTTATAAAGTTGACCATGATGCAACGATTATTGAAAGTGATGGAACCGAGGTGCGGATTGCGCCACTTGAC
GTTCAATTTCAATCAGCGAAATTATCGCAACGCATTTTGACGAACTTTGCGGGACCCATGAATAACTTTATCTTAGGGTT
TATTCTGTTTACGTTAGCGGTCTTTCTACAAGGAGGCGTCACTGATTTAAACACGAATCAAATTGGACAAGTGATTCCTA
ATGGCCCAGCCGCAGAAGCTGGGTTGAAAGAAAACGATAAAGTCTTATCGATTAATAATCAAAAAATCAAAAAATACGAA
GATTTTACAACCATTGTGCAGAAGAACCCCGAAAAGCCGTTAACGTTCGTAGTTGAGCGTAACGGCAAAGAAGAGCAACT
AACAGTGACACCAGAAAAACAAAAAGTGGAAAAACAAACGATTGGTAAAGTCGGCGTTTATCCTTATATGAAAACCGATT
TACCGTCAAAATTGATGGGCGGTATTCAGGATACTTTGAATAGTACGACACAGATTTTTAAAGCACTCGGCTCACTATTC
ACAGGCTTTAGTTTAAACAAACTAGGTGGGCCAGTCATGATGTTTAAATTATCGGAAGAAGCATCCAATGCTGGAGTAAG
TACAGTTGTATTCTTAATGGCCATGTTGTCAATGAACTTAGGGATTATTAATTTGTTGCCGATCCCAGCTTTAGATGGCG
GGAAAATTGTCTTAAACATTATTGAAGGTGTACGTGGAAAACCAATTAGTCCTGAAAAAGAAGGCATCATTACGTTAATT
GGCTTTGGGTTTGTCATGGTGTTAATGGTGTTAGTTACTTGGAACGATATTCAACGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-260)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.738

100

0.545
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545

Multiple sequence alignment