Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   M5C73_RS09815 Genome accession   NZ_CP098790
Coordinates   1993133..1993834 (-) Length   233 a.a.
NCBI ID   WP_252160078.1    Uniprot ID   -
Organism   Lactococcus lactis strain WiKim0124     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1988133..1998834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5C73_RS09795 (M5C73_09795) - 1988243..1989460 (-) 1218 WP_033899923.1 cysteine desulfurase -
  M5C73_RS09800 (M5C73_09800) sufD 1989460..1990716 (-) 1257 WP_017864923.1 Fe-S cluster assembly protein SufD -
  M5C73_RS09805 (M5C73_09805) sufC 1990854..1991624 (-) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  M5C73_RS09810 (M5C73_09810) - 1991799..1993130 (-) 1332 WP_250354272.1 MraY family glycosyltransferase -
  M5C73_RS09815 (M5C73_09815) mecA 1993133..1993834 (-) 702 WP_252160078.1 adaptor protein MecA Regulator
  M5C73_RS09820 (M5C73_09820) - 1993964..1994698 (-) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  M5C73_RS09825 (M5C73_09825) - 1994698..1995384 (-) 687 WP_058203973.1 amino acid ABC transporter permease -
  M5C73_RS09830 (M5C73_09830) - 1995531..1996439 (-) 909 WP_003130548.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27091.48 Da        Isoelectric Point: 4.1286

>NTDB_id=697982 M5C73_RS09815 WP_252160078.1 1993133..1993834(-) (mecA) [Lactococcus lactis strain WiKim0124]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALEVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=697982 M5C73_RS09815 WP_252160078.1 1993133..1993834(-) (mecA) [Lactococcus lactis strain WiKim0124]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGAAGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991
  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966