Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | LLCC_RS03490 | Genome accession | NZ_AP018499 |
| Coordinates | 679710..680201 (+) | Length | 163 a.a. |
| NCBI ID | WP_015082943.1 | Uniprot ID | A0A166XX03 |
| Organism | Lactococcus cremoris strain C4 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 674710..685201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLCC_RS03475 (LLCC_0742) | rpsB | 675593..676360 (+) | 768 | WP_011836067.1 | 30S ribosomal protein S2 | - |
| LLCC_RS03480 (LLCC_0743) | tsf | 676482..677510 (+) | 1029 | WP_011677206.1 | translation elongation factor Ts | - |
| LLCC_RS03485 (LLCC_0744) | ezrA | 677715..679445 (+) | 1731 | WP_061778312.1 | septation ring formation regulator EzrA | - |
| LLCC_RS03490 (LLCC_0745) | comX | 679710..680201 (+) | 492 | WP_015082943.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 19661.45 Da Isoelectric Point: 6.0256
>NTDB_id=69782 LLCC_RS03490 WP_015082943.1 679710..680201(+) (comX) [Lactococcus cremoris strain C4]
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
Nucleotide
Download Length: 492 bp
>NTDB_id=69782 LLCC_RS03490 WP_015082943.1 679710..680201(+) (comX) [Lactococcus cremoris strain C4]
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Lactococcus lactis subsp. cremoris KW2 |
98.773 |
100 |
0.988 |
| comX | Lactococcus lactis subsp. lactis strain DGCC12653 |
75.46 |
100 |
0.755 |