Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NDR85_RS06465 Genome accession   NZ_CP098738
Coordinates   1308939..1309595 (+) Length   218 a.a.
NCBI ID   WP_024120921.1    Uniprot ID   A0A9Q4HP90
Organism   Bacillus halotolerans strain XE48     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1303939..1314595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDR85_RS06435 (NDR85_06435) oppF 1304399..1305316 (+) 918 WP_024120917.1 oligopeptide ABC transporter ATP-binding protein OppF -
  NDR85_RS06440 (NDR85_06440) - 1305423..1306640 (+) 1218 WP_263870994.1 MFS transporter -
  NDR85_RS06445 (NDR85_06445) - 1306808..1307386 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  NDR85_RS06450 (NDR85_06450) spx 1307566..1307961 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  NDR85_RS06455 (NDR85_06455) - 1308004..1308660 (-) 657 WP_044156385.1 TerC family protein -
  NDR85_RS06460 (NDR85_06460) - 1308832..1308972 (+) 141 WP_125825429.1 hypothetical protein -
  NDR85_RS06465 (NDR85_06465) mecA 1308939..1309595 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  NDR85_RS06470 (NDR85_06470) coiA 1309753..1310904 (+) 1152 WP_044156383.1 competence protein CoiA family protein Machinery gene
  NDR85_RS06475 (NDR85_06475) pepF 1311134..1312963 (+) 1830 WP_176471078.1 oligoendopeptidase F -
  NDR85_RS06480 (NDR85_06480) - 1313000..1313167 (-) 168 WP_024120925.1 hypothetical protein -
  NDR85_RS06485 (NDR85_06485) spxH 1313481..1314380 (-) 900 WP_044156379.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25879.69 Da        Isoelectric Point: 4.0810

>NTDB_id=697536 NDR85_RS06465 WP_024120921.1 1308939..1309595(+) (mecA) [Bacillus halotolerans strain XE48]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQEVNQEEKEQKLQFVLRFDDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFYNLTDEEVENQLSILLEYASESSISIHRLEEYGKLVVSEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=697536 NDR85_RS06465 WP_024120921.1 1308939..1309595(+) (mecA) [Bacillus halotolerans strain XE48]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTATGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTTATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTTGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTGGACAAAGGCTTAGAAATTATCGTCACCAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGAAGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGGTTTG
ATGACTTCGAAGATGTAATTTCTCTATCTAAATTAAACGTTAACGGAAGTAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTACAATTTGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGTC
TGAATCTTCAATCAGCATACACCGTCTTGAAGAATACGGCAAGCTGGTTGTGTCAGAGCACGCTCTTGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

96.789

100

0.968