Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   M5E07_RS15090 Genome accession   NZ_CP098732
Coordinates   3133756..3135315 (+) Length   519 a.a.
NCBI ID   WP_252220472.1    Uniprot ID   A0AAE9RZY4
Organism   Acinetobacter tibetensis strain Y-23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3128756..3140315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E07_RS15065 (M5E07_15065) thrC 3129028..3130167 (+) 1140 WP_116762440.1 threonine synthase -
  M5E07_RS15070 (M5E07_15070) - 3130231..3131010 (-) 780 WP_252220466.1 hypothetical protein -
  M5E07_RS15075 (M5E07_15075) - 3131038..3131658 (-) 621 WP_252220468.1 hypothetical protein -
  M5E07_RS15080 (M5E07_15080) pbpG 3131808..3132866 (-) 1059 WP_252220470.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  M5E07_RS15085 (M5E07_15085) - 3133084..3133719 (+) 636 WP_016168485.1 response regulator -
  M5E07_RS15090 (M5E07_15090) pilS 3133756..3135315 (+) 1560 WP_252220472.1 ATP-binding protein Regulator
  M5E07_RS15095 (M5E07_15095) pilR 3135340..3136749 (+) 1410 WP_165815717.1 sigma-54 dependent transcriptional regulator Regulator
  M5E07_RS15100 (M5E07_15100) - 3136750..3137916 (-) 1167 WP_116762428.1 S41 family peptidase -
  M5E07_RS15105 (M5E07_15105) gpmI 3137940..3139487 (-) 1548 WP_252220474.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 519 a.a.        Molecular weight: 59726.19 Da        Isoelectric Point: 6.4932

>NTDB_id=697488 M5E07_RS15090 WP_252220472.1 3133756..3135315(+) (pilS) [Acinetobacter tibetensis strain Y-23]
MQHSQYFELNQYFFGLWYAAYRLLITSCLVLIFILTQDELSTNYEFPQLYFYVLWGYFFINCVQFFNLKHFKQHIPQQFT
FIFIVDVVALSLLTIATNGPNLSISILFLTTIFAASLLLNTQKALIITLIAVIAVIYQQFLISFLTQHSFQNLGNSVILA
VLFFVFYICGQIAVRRFQLLDHVNFSQSQELKRLQNINRYILEQIETGYLVLDENCHILLSNPAACALLGIAPFYAFDKY
PLYKLQPDLFELLDFDQVQNGEKFQFESQLSRYHLHIEVQKLIVPQQVLTLLVIQDGQKMNQQVQQLKLAALGQLSASIA
HEIRNPLAAIVQANELLPHSTVDQQQTLSQMISKQTKRIDKIVQDTLSMVRNQGTQPISIQLDHFIPIFIQEDLPDLKTK
ILCHIAPQLSLNFDEAQFRQVLINLIRNAIRHNSPERSTIELHCYTQDKNIHIDVCDFGEGVAIHDQAHLFQPFFSTAIT
GTGLGLYLSHSFCEANQALLSYVEQQQGACFRIQCRQLT

Nucleotide


Download         Length: 1560 bp        

>NTDB_id=697488 M5E07_RS15090 WP_252220472.1 3133756..3135315(+) (pilS) [Acinetobacter tibetensis strain Y-23]
ATGCAACATTCCCAATATTTCGAATTAAATCAATACTTTTTTGGGCTGTGGTATGCCGCTTACCGCTTATTGATCACCAG
TTGTCTGGTCCTCATTTTTATTCTGACCCAAGATGAACTCTCAACCAACTACGAGTTTCCCCAACTTTATTTTTATGTGC
TCTGGGGCTATTTTTTCATTAACTGCGTACAATTTTTTAATCTGAAGCATTTTAAACAGCATATTCCTCAGCAGTTTACA
TTCATTTTCATTGTCGATGTTGTTGCCTTAAGCCTACTCACCATCGCCACCAATGGTCCGAATTTAAGTATCAGTATCCT
GTTCTTAACCACCATTTTTGCAGCTTCGTTACTCCTCAATACGCAAAAAGCCTTAATTATTACGCTAATTGCGGTGATTG
CTGTGATCTATCAACAATTCTTGATCAGCTTTCTGACCCAACATTCATTCCAGAATCTGGGGAATAGTGTGATCTTGGCG
GTTTTATTTTTTGTCTTTTATATCTGTGGACAAATTGCAGTTCGTCGCTTCCAACTGCTCGATCATGTCAATTTTTCCCA
ATCACAAGAACTGAAACGTCTGCAAAACATTAATCGCTATATCTTGGAACAAATTGAAACTGGCTATTTGGTCTTAGATG
AAAACTGCCATATTCTTTTAAGTAACCCTGCTGCCTGTGCTTTACTGGGCATTGCGCCATTTTACGCCTTTGATAAATAT
CCGCTGTATAAACTACAACCTGATTTATTTGAGTTACTGGACTTTGATCAGGTGCAAAACGGGGAAAAATTTCAGTTTGA
ATCTCAGCTCAGTCGCTATCATTTGCATATTGAAGTGCAAAAACTGATTGTCCCTCAACAGGTACTGACGCTTTTGGTCA
TTCAAGATGGGCAAAAAATGAATCAACAGGTACAACAATTAAAATTGGCTGCGCTGGGGCAGCTCTCTGCCAGTATTGCG
CATGAAATTCGTAACCCCTTAGCAGCCATTGTTCAAGCCAATGAATTACTACCGCACAGTACGGTTGATCAACAGCAAAC
GCTGAGCCAAATGATTAGCAAGCAAACCAAGCGGATTGACAAAATTGTGCAAGACACTTTAAGTATGGTCCGTAATCAAG
GCACTCAACCGATTAGCATACAATTAGATCATTTTATCCCGATTTTTATTCAAGAAGACCTGCCCGATCTTAAGACTAAA
ATTTTATGTCATATTGCCCCACAGCTCAGTTTAAACTTTGATGAAGCACAATTTAGACAGGTATTAATTAATTTAATTCG
CAATGCAATCCGACATAATTCACCTGAACGCAGTACAATAGAACTCCACTGCTATACGCAGGATAAAAACATTCACATTG
ATGTGTGTGATTTTGGGGAAGGCGTGGCGATTCACGATCAAGCCCACCTGTTTCAACCGTTCTTTAGTACCGCGATTACA
GGAACAGGTTTAGGATTATATCTATCACATAGCTTTTGCGAGGCCAATCAAGCCCTCTTAAGCTATGTAGAACAACAACA
GGGAGCTTGCTTTCGCATTCAATGCCGACAGCTAACTTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(311-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(414-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

56.461

96.917

0.547