Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NDR94_RS20050 Genome accession   NZ_CP098731
Coordinates   4293625..4294032 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain NRCB010     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4288625..4299032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDR94_RS20030 (NDR94_20000) - 4289583..4290449 (-) 867 WP_011914955.1 CheR family methyltransferase -
  NDR94_RS20035 (NDR94_20005) - 4290510..4292558 (-) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  NDR94_RS20040 (NDR94_20010) - 4292637..4293173 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  NDR94_RS20045 (NDR94_20015) pilH 4293215..4293580 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  NDR94_RS20050 (NDR94_20020) pilG 4293625..4294032 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  NDR94_RS20055 (NDR94_20025) gshB 4294269..4295219 (+) 951 WP_011914959.1 glutathione synthase -
  NDR94_RS20060 (NDR94_20030) - 4295307..4296200 (+) 894 WP_019405529.1 energy transducer TonB -
  NDR94_RS20065 (NDR94_20035) - 4296266..4296835 (+) 570 WP_011914961.1 YqgE/AlgH family protein -
  NDR94_RS20070 (NDR94_20040) ruvX 4296832..4297260 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  NDR94_RS20075 (NDR94_20045) pyrR 4297278..4297793 (+) 516 WP_011914963.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NDR94_RS20080 (NDR94_20050) - 4297847..4298863 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=697449 NDR94_RS20050 WP_003282729.1 4293625..4294032(-) (pilG) [Stutzerimonas stutzeri strain NRCB010]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=697449 NDR94_RS20050 WP_003282729.1 4293625..4294032(-) (pilG) [Stutzerimonas stutzeri strain NRCB010]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4