Detailed information NTG0696893

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NDQ64_RS09405
• Genome accession: NZ_CP098544
• Coordinates: 1788497..1789750 (-)
• Length: 417 a.a.
• NCBI ID: WP_003696286.1
• Uniprot ID: A0AB74ETB0
• Organism: Neisseria gonorrhoeae strain 10296
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1783497..1794750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDQ64_RS09375 (NDQ64_09270)	-	1783807..1784175 (+)	369	Protein_1813	pilin	-
NDQ64_RS12030	-	1784175..1784522 (+)	348	Protein_1814	pilin	-
NDQ64_RS09385 (NDQ64_09280)	-	1784562..1784933 (+)	372	Protein_1815	pilin	-
NDQ64_RS09390 (NDQ64_09285)	lpxC	1785427..1786350 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
NDQ64_RS09395 (NDQ64_09290)	pilE	1786456..1786878 (+)	423	WP_260244334.1	pilin	Machinery gene
NDQ64_RS09400 (NDQ64_09295)	-	1787543..1788229 (+)	687	WP_311201987.1	opacity family porin	-
NDQ64_RS09405 (NDQ64_09300)	pilA	1788497..1789750 (-)	1254	WP_003696286.1	signal recognition particle-docking protein FtsY	Machinery gene
NDQ64_RS09410 (NDQ64_09305)	msrAB	1789896..1791464 (+)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
NDQ64_RS09415 (NDQ64_09310)	-	1791548..1792033 (-)	486	WP_003687001.1	CinA family protein	-
NDQ64_RS09420 (NDQ64_09315)	-	1792060..1792908 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
NDQ64_RS09425 (NDQ64_09320)	-	1793002..1794003 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44331.70 Da
• Isoelectric Point: 4.8647

>NTDB_id=696893 NDQ64_RS09405 WP_003696286.1 1788497..1789750(-) (pilA) [Neisseria gonorrhoeae strain 10296]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=696893 NDQ64_RS09405 WP_003696286.1 1788497..1789750(-) (pilA) [Neisseria gonorrhoeae strain 10296]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	100	100	1