Detailed information NTG0696326

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NDK36_RS19990
• Genome accession: NZ_CP098491
• Coordinates: 3726135..3727280 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NB205
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3721135..3732280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDK36_RS19970 (NDK36_19970)	albF	3721151..3722431 (+)	1281	WP_014481221.1	pitrilysin family protein	-
NDK36_RS19975 (NDK36_19975)	albG	3722428..3723129 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NDK36_RS19980 (NDK36_19980)	ywhL	3723135..3724511 (-)	1377	WP_014481223.1	YncE family protein	-
NDK36_RS19985 (NDK36_19985)	ywhK	3724550..3725905 (-)	1356	WP_014481224.1	YncE family protein	-
NDK36_RS22550	-	3725902..3726132 (-)	231	Protein_3887	hypothetical protein	-
NDK36_RS19990 (NDK36_19990)	rapF	3726135..3727280 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
NDK36_RS19995 (NDK36_19995)	phrF	3727264..3727383 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NDK36_RS20000 (NDK36_20000)	-	3727481..3727908 (+)	428	Protein_3890	YbaK/EbsC family protein	-
NDK36_RS20005 (NDK36_20005)	speB	3727973..3728845 (-)	873	WP_003227545.1	agmatinase	-
NDK36_RS20010 (NDK36_20010)	speE	3728906..3729736 (-)	831	WP_003227543.1	spermidine synthase	-
NDK36_RS20015 (NDK36_20015)	pbpG	3729938..3732013 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=696326 NDK36_RS19990 WP_014481226.1 3726135..3727280(+) (rapF) [Bacillus subtilis strain NB205]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=696326 NDK36_RS19990 WP_014481226.1 3726135..3727280(+) (rapF) [Bacillus subtilis strain NB205]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572