Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NDK36_RS02160 Genome accession   NZ_CP098491
Coordinates   423509..424459 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain NB205     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418509..429459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDK36_RS02135 (NDK36_02135) rapC 419964..421112 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  NDK36_RS02140 (NDK36_02140) phrC 421096..421218 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NDK36_RS02145 (NDK36_02145) yczM 421317..421406 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NDK36_RS02150 (NDK36_02150) yczN 421488..421601 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  NDK36_RS02155 (NDK36_02155) thrD 421754..423118 (-) 1365 WP_014478832.1 aspartate kinase -
  NDK36_RS02160 (NDK36_02160) ceuB 423509..424459 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  NDK36_RS02165 (NDK36_02165) yclO 424452..425399 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  NDK36_RS02170 (NDK36_02170) yclP 425393..426151 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  NDK36_RS02175 (NDK36_02175) yclQ 426173..427126 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NDK36_RS02180 (NDK36_02180) - 427356..428288 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=696263 NDK36_RS02160 WP_014475804.1 423509..424459(+) (ceuB) [Bacillus subtilis strain NB205]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=696263 NDK36_RS02160 WP_014475804.1 423509..424459(+) (ceuB) [Bacillus subtilis strain NB205]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525